Pinned Repositories
amapec
Antimicrobial activity prediction for fungal effector candidates
awesome-readme
A curated list of awesome READMEs
blast-based-pairwise-genome-comparer
A blast-based programme to compare two genomes of interest, and retrieve functional data (paralog families with network representations, id-to-GO/Pfam/COG associations, reciprocal best matches list...)
Effect-Of-Biological-Categories-On-Genomes-Composition
Extract-ITS-sequences-from-a-fungal-genome
genomescope
Fast genome analysis from unassembled short reads
Genomic-signatures-of-host-adaptation-in-a-ubiquitous-fungal-endophyte
Scripts related to the second project of my PhD thesis
phylorep
Simple script retrieving the ID of the most representative member of a gene/protein family, using the family phylogenetic tree as an input
Scripts-from-Mesny-et-al.-2021
All scripts and analyses from project Mesny et al. 2021.
Scripts-from-review-Mesny-et-al.-2023-
Scripts from review Mesny et al., 2023
fantin-mesny's Repositories
fantin-mesny/Extract-ITS-sequences-from-a-fungal-genome
fantin-mesny/Scripts-from-Mesny-et-al.-2021
All scripts and analyses from project Mesny et al. 2021.
fantin-mesny/amapec
Antimicrobial activity prediction for fungal effector candidates
fantin-mesny/phylorep
Simple script retrieving the ID of the most representative member of a gene/protein family, using the family phylogenetic tree as an input
fantin-mesny/Scripts-from-review-Mesny-et-al.-2023-
Scripts from review Mesny et al., 2023
fantin-mesny/awesome-readme
A curated list of awesome READMEs
fantin-mesny/blast-based-pairwise-genome-comparer
A blast-based programme to compare two genomes of interest, and retrieve functional data (paralog families with network representations, id-to-GO/Pfam/COG associations, reciprocal best matches list...)
fantin-mesny/Effect-Of-Biological-Categories-On-Genomes-Composition
fantin-mesny/genomescope
Fast genome analysis from unassembled short reads
fantin-mesny/Genomic-signatures-of-host-adaptation-in-a-ubiquitous-fungal-endophyte
Scripts related to the second project of my PhD thesis
fantin-mesny/networkx
Official NetworkX source code repository.
fantin-mesny/Scripts-from-Vannier-et-al.-2023
Scripts from Vannier et al., 2023