fbartusch
PhD candidate / M.Sc. Bioinformatics HPC cluster admin; interested in workflow systems and reproducible research
University of Tübingen
Pinned Repositories
apache-jena-playground
configs
Config files used to define parameters specific to compute environments at different Institutions
dataprov
Automatic provenance metadata creator
FAMOUS_BinAC
Changes and documentation needed to run FAMOUS in bwForCluster BinAC.
fbartusch.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
galaxy2singularity
Automatic containerization and execution of Galaxy workflows in Singularity container
nf-provone
Nextflow plugin for provenance metadata
provonetoolbox
ProvToolbox-playground
snakemake_tutorial
fbartusch's Repositories
fbartusch/dataprov
Automatic provenance metadata creator
fbartusch/snakemake_tutorial
fbartusch/galaxy2singularity
Automatic containerization and execution of Galaxy workflows in Singularity container
fbartusch/apache-jena-playground
fbartusch/FAMOUS_BinAC
Changes and documentation needed to run FAMOUS in bwForCluster BinAC.
fbartusch/fbartusch.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
fbartusch/fuseki-service
fbartusch/nf-provone
Nextflow plugin for provenance metadata
fbartusch/provonetoolbox
fbartusch/ProvToolbox-playground
fbartusch/graph-visualization-playground
fbartusch/metaGEM
:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data
fbartusch/nf-prov
fbartusch/scif
scientific filesystem: a filesystem organization for scientific software and metadata