fdchevalier
Staff scientist @ Texas Biomed - parasitologist, bioinformatician, former water boy and butcher
@txbiomedSan Antonio. Tx
Pinned Repositories
Biomphalaria-hemolymph-microbiome
Biomphalaria-organ-microbiomes
chromium-ssh
Create a SSH tunnel and start chromium
filezilla-tunnel
functional_analysis
Functional analysis of genetic mutations
jupyter-tunnel
msg
Multiplexed Shotgun Genotyping
PZQ-R_DNA-seq
PZQ-R_RNA-seq
SWAMP
fdchevalier's Repositories
fdchevalier/filezilla-tunnel
fdchevalier/SWAMP
fdchevalier/Biomphalaria-organ-microbiomes
fdchevalier/chromium-ssh
Create a SSH tunnel and start chromium
fdchevalier/functional_analysis
Functional analysis of genetic mutations
fdchevalier/jupyter-tunnel
fdchevalier/msg
Multiplexed Shotgun Genotyping
fdchevalier/myscreen
Reattach screen session using a numbered list
fdchevalier/Old-World-SmSULT-OR-variation
This is the code used to analyze SmSULT-OR variants from sequencing of schistosome exomes.
fdchevalier/plot.matrix
Visualizes a matrix object plainly as heatmap. It provides a single S3 function plot for matrices.
fdchevalier/poppr
🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
fdchevalier/publish-fq
Publish fastq files generated by bcl2fastq the "old Casava way" (by samples or by projects)
fdchevalier/PZQ-R_DNA-seq
fdchevalier/PZQ-R_field_variants
fdchevalier/PZQ-R_RNA-seq
fdchevalier/selectionTools
Pipeline to take VCF through to Selection Analysis.
fdchevalier/Sm-GFF-HHPred-table
fdchevalier/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
fdchevalier/startmrca
An R package to estimate the timing of selection for a beneficial allele.
fdchevalier/trim_polyphred
fdchevalier/Biomphalaria-hemolymph-microbiome
fdchevalier/bioproject-dl
fdchevalier/Cercarial-production
fdchevalier/conda-recipes
fdchevalier/fdchevalier
fdchevalier/glmmTMB
glmmTMB
fdchevalier/Sm_gene_expression
Schistosoma mansoni gene expresion at different stages
fdchevalier/styles
Official repository for Citation Style Language (CSL) citation styles.