Pinned Repositories
fiji-workshop
Materials supporting the ImageJ/Fiji workshop at Harvard Medical School.
micromanager-gui
napari-micromanager
napari-sam-prompt
A napari plugin that implements SAM prompts predictor
nd2
Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction
ndv
Simple, fast-loading, n-dimensional array viewer with minimal dependencies.
napari-micromanager
GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets
pymmcore-plus
Pure python/C++ micro-manager ecosystem
pymmcore-widgets
A set of Qt-based widgets onto the pymmcore-plus model
useq-schema
An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.
fdrgsp's Repositories
fdrgsp/micromanager-gui
fdrgsp/napari-sam-prompt
A napari plugin that implements SAM prompts predictor
fdrgsp/fiji-workshop
Materials supporting the ImageJ/Fiji workshop at Harvard Medical School.
fdrgsp/napari-micromanager
fdrgsp/nd2
Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction
fdrgsp/ndv
Simple, fast-loading, n-dimensional array viewer with minimal dependencies.
fdrgsp/nictool
fdrgsp/pymmcore
Python bindings for MMCore, Micro-Manager's device control layer
fdrgsp/pymmcore-MDA-writers
MDA writers for pymmcore-plus
fdrgsp/pymmcore-plus
Control pymmcore (micro-manager) running in another process
fdrgsp/pymmcore-widgets
A set of Qt-based widgets onto the pymmcore-plus model
fdrgsp/pyrepo-cookiecutter
personal repo bootstrap
fdrgsp/pytorch-tutorial
PyTorch Tutorial for Deep Learning Researchers
fdrgsp/SAM-using-Python-for-Microscopy-Data
fdrgsp/useq-schema