feifei9606

feifei9606's Stars

• agshumate/Liftoff

  An accurate GFF3/GTF lift over pipeline

  Language:Python44854

• labmlai/annotated_deep_learning_paper_implementations

  🧑‍🏫 60+ Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠

  Language:Python57.4k5.9k

• PaddlePaddle/Paddle

  PArallel Distributed Deep LEarning: Machine Learning Framework from Industrial Practice （『飞桨』核心框架，深度学习&机器学习高性能单机、分布式训练和跨平台部署）

  Language:C++22.4k5.6k

• toeverything/AFFiNE

  There can be more than Notion and Miro. AFFiNE(pronounced [ə‘fain]) is a next-gen knowledge base that brings planning, sorting and creating all together. Privacy first, open-source, customizable and ready to use.

  Language:TypeScript43.6k2.8k

• Illumina/hap.py

  Haplotype VCF comparison tools

  Language:C++422125

• tprodanov/parascopy

  Copy number estimation and variant calling for duplicated genes using WGS.

  Language:Python264

• lxgw/LxgwWenKai

  An open-source Chinese font derived from Fontworks' Klee One. 一款开源中文字体，基于 FONTWORKS 出品字体 Klee One 衍生。

  Language:Batchfile18.5k524

• rabbitmq/rabbitmq-server

  Open source RabbitMQ: core server and tier 1 (built-in) plugins

  Language:JavaScript12.4k3.9k

• onceupon/Bash-Oneliner

  A collection of handy Bash One-Liners and terminal tricks for data processing and Linux system maintenance.

  10.3k631

• odelaneau/GLIMPSE

  Low Coverage Calling of Genotypes

  Language:C++14228

• dzhang32/ggtranscript

  Visualizing transcript structure and annotation using ggplot2

  Language:R1339

• sokrypton/ColabFold

  Making Protein folding accessible to all!

  Language:Jupyter Notebook2k507

• ToolJet/ToolJet

  Low-code platform for building business applications. Connect to databases, cloud storages, GraphQL, API endpoints, Airtable, Google sheets, OpenAI, etc and build apps using drag and drop application builder. Built using JavaScript/TypeScript. 🚀

  Language:JavaScript33.5k4.3k

• imgag/ClinCNV

  Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data

  Language:R792

• pangenome/odgi

  Optimized Dynamic Genome/Graph Implementation: understanding pangenome graphs

  Language:C++19841

• django/django

  The Web framework for perfectionists with deadlines.

  Language:Python81.6k32k

• celery/celery

  Distributed Task Queue (development branch)

  Language:Python25.1k4.7k

• obophenotype/human-phenotype-ontology

  Ontology for the description of human clinical features

  Language:Makefile29552

• arangodb/arangodb

  🥑 ArangoDB is a native multi-model database with flexible data models for documents, graphs, and key-values. Build high performance applications using a convenient SQL-like query language or JavaScript extensions.

  Language:C++13.6k837

• vcflib/vcflib

  C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings

  Language:C++629221

• dragonflydb/dragonfly

  A modern replacement for Redis and Memcached

  Language:C++26.4k982

• Unitech/pm2

  Node.js Production Process Manager with a built-in Load Balancer.

  Language:JavaScript41.7k2.6k

• pachterlab/ffq

  A tool to find sequencing data and metadata from public databases.

  Language:Python55647

• pachterlab/gget

  🧬 gget enables efficient querying of genomic reference databases

  Language:Python95975

• rustdesk/rustdesk

  An open-source remote desktop application designed for self-hosting, as an alternative to TeamViewer.

  Language:Rust78.1k10.8k

• EfficientDL/book

  PDFs and Codelabs for the Efficient Deep Learning book.

  Language:Jupyter Notebook19124

• PaddlePaddle/PaddleNLP

  👑 Easy-to-use and powerful NLP and LLM library with 🤗 Awesome model zoo, supporting wide-range of NLP tasks from research to industrial applications, including 🗂Text Classification, 🔍 Neural Search, ❓ Question Answering, ℹ️ Information Extraction, 📄 Document Intelligence, 💌 Sentiment Analysis etc.

  Language:Python12.2k3k

• cpockrandt/genmap

  GenMap - Fast and Exact Computation of Genome Mappability

  Language:C++10418

• BenLangmead/bowtie2

  A fast and sensitive gapped read aligner

  Language:C++684160

• lh3/minigraph

  Sequence-to-graph mapper and graph generator

  Language:C42338