Pinned Repositories
AdvancePython-master
alphafold3
alphafold3-pytorch
Implementation of Alphafold 3 in Pytorch
AlternativeSplicing
This is a algorithm for detecting cancer alternative splicing events
alternativeSplicingEvents.hg38
Alternative splicing event annotation for Human assembly (hg38)
Attune
Awesome-Causal-Papers
We organize papers related to causal that published on top conferences recently. (因果领域论文分类汇总)
In-depth-NGS-Data-Analysis-Course
Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.
PythonDataScienceHandbook
Python Data Science Handbook: full text in Jupyter Notebooks
scGCO
Single-cell Graph Cuts Optimization
fengwanwan's Repositories
fengwanwan/PythonDataScienceHandbook
Python Data Science Handbook: full text in Jupyter Notebooks
fengwanwan/scGCO
Single-cell Graph Cuts Optimization
fengwanwan/alphafold3
fengwanwan/alphafold3-pytorch
Implementation of Alphafold 3 in Pytorch
fengwanwan/Attune
fengwanwan/awesome-deep-learning-single-cell-papers
fengwanwan/awesome-graph-transformer
Papers about graph transformers.
fengwanwan/awesome-pretrain-on-molecules
A curated list of resources for molecular pre-trained models or chemical language models
fengwanwan/cfm-scheduler
Implement different schedulers for flow matching models
fengwanwan/ChatCell
ChatCell: Facilitating Single-Cell Analysis with Natural Language
fengwanwan/clinicalml-scBERT-NMI
analysis code to reproduce results in NMI submission
fengwanwan/code_for_lecture
个人对于课程代码的实现都摆在这里
fengwanwan/cs231n.github.io
Public facing notes page
fengwanwan/dance
DANCE: A Deep Learning Library and Benchmark Platform for Single-Cell Analysis
fengwanwan/gpt-pytorch
PyTorch Implementation of OpenAI GPT
fengwanwan/graph-based-deep-learning-literature
links to conference publications in graph-based deep learning
fengwanwan/ImbalancedLearningForSingleCellFoundationModels
fengwanwan/LLM_xAI_Biomarkers
fengwanwan/LucaOne
The LucaOne’s model code.
fengwanwan/machine-learning-notes
My continuously updated Machine Learning, Probabilistic Models and Deep Learning notes and demos (2000+ slides) 我不间断更新的机器学习，概率模型和深度学习的讲义(2000+页)和视频链接
fengwanwan/nlp-tutorial
Natural Language Processing Tutorial for Deep Learning Researchers
fengwanwan/openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
fengwanwan/RFM
The official codebase for Reflected Flow Matching (ICML 2024)
fengwanwan/sc-foundation-eval
Code for evaluating single cell foundation models scBERT and scGPT
fengwanwan/scEval
Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.
fengwanwan/scGCO_Tutorials
fengwanwan/single-cell-pseudotime
An overview of algorithms for estimating pseudotime in single-cell RNA-seq data
fengwanwan/single-cell-transformer-papers
fengwanwan/single_cell_pb
Deep learning models for the Kaggle's Open Problems – Single-Cell Perturbations competition
fengwanwan/Spatial_PF