/py-cortex-api

Python API for cortex

Primary LanguagePython

py-cortex-api

Python API for cortex.

Install

pip3 install git+https://github.com/iqbal-lab-org/py-cortex-api

Requierments

sudo apt install r-base-core

Usage

import cortex
cortex.calls("./reference.fasta",
             "./reads.fastq",
             "./output",
             "sample_name")

Licence

MIT