fka21
Bioinformatician working at Max Planck Institute. Interested in everything genomics.
Max Planck Institute for Multidisciplinary Sciences
Pinned Repositories
mat_gene_exp_evol
Scripts used for the "Comparative Analysis of Maternal Gene Expression Patterns: Unraveling Evolutionary Signatures Across Reproductive Modes" publication.
CNE_PFAR
Repository containing scripts used for analysing conserved non-coding elements in the M.opercularis genome.
drug_sensitivity_modeling
This repo contains scripts which I wrote to build predictive models on cancer cell line drug sensitivities.
flatworm_genome_methylation
Explorations of cytosine methylation in flatworms using PacBio sequencing.
genomics_smk_pipelines
Collection of snakemake pipelines I used during genome assemblies.
worm_metabolomics
Scripts used for comparing small and big worm metabolomics.
mummer
Mummer alignment tool
FANTASIA
mutationplanner
fka21's Repositories
fka21/mat_gene_exp_evol
Scripts used for the "Comparative Analysis of Maternal Gene Expression Patterns: Unraveling Evolutionary Signatures Across Reproductive Modes" publication.
fka21/CNE_PFAR
Repository containing scripts used for analysing conserved non-coding elements in the M.opercularis genome.
fka21/drug_sensitivity_modeling
This repo contains scripts which I wrote to build predictive models on cancer cell line drug sensitivities.
fka21/flatworm_genome_methylation
Explorations of cytosine methylation in flatworms using PacBio sequencing.
fka21/genomics_smk_pipelines
Collection of snakemake pipelines I used during genome assemblies.
fka21/worm_metabolomics
Scripts used for comparing small and big worm metabolomics.