Pinned Repositories
2016-aug-nonmodel-rnaseq
alignment_filtering
Code and data for "Limited Utility of Residue Masking for Positive-Selection Inference," by SJS, ETD, COW.
biotools
A list of useful bioinformatics resources
cv_resume
dataviz
A book covering the fundamentals of data visualization
EMBOtrinityWorkshopSept2016
rnaseq workshop w/ EMBO in Sept 2016, based on the Krumlov 2016 materials
FastqSifter
Separate contaminating reads from FASTQ files (e.g., mitochondria, symbionts, bacterial or human contaminants)
genome-scripts
Genome Scripts used in fungal comparative genomics
orthologr
Comparative Genomics with R
2022-amel_bter_expression_nachrs
Comparative expression analysis of nAChR subunit genes in Apis mellifera and Bombus terrestris
flopezo's Repositories
flopezo/biotools
A list of useful bioinformatics resources
flopezo/dataviz
A book covering the fundamentals of data visualization
flopezo/genome-scripts
Genome Scripts used in fungal comparative genomics
flopezo/cv_resume
flopezo/flopezo.github.io
flopezo/2018-03-06-ibioic
Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.
flopezo/asthma
RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)
flopezo/awesome-datascience
:memo: An awesome Data Science repository to learn and apply for real world problems.
flopezo/awesome-r-dataviz
Curated resources about Data Visualization, Drawing & Publishing in R
flopezo/Bandage
a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
flopezo/Bioinformatics-Workshops
Workshops presented by the Gladstone Bioinformatics Core
flopezo/cgat
CGAT - Computational Genomics Analysis Tools
flopezo/cheatsheets
RStudio Cheat Sheets
flopezo/compbio_src
Introduction to Computational Biology - source Rmarkdown files
flopezo/DGE_workshop
flopezo/ds4stats
Data science for statisticians workshop
flopezo/gffcompare
classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF
flopezo/homebrew-science
:snowflake: Scientific formulae for Homebrew and Linuxbrew (legacy)
flopezo/Intro-to-R-with-DGE
flopezo/main
Summary of training offered by the Harvard Chan Bioinformatics Core
flopezo/notes
flopezo/opendata_viz
Code behind medium blog
flopezo/pollinator_health_literature
Compilation of literature on the effects of pesticides on insect pollinators
flopezo/RNA_mapping
flopezo/shiny-server
My personal Shiny server
flopezo/Specifications
GFF and GVF specification documents
flopezo/systemPipeR
Project Website:
flopezo/tldr
:books: Simplified and community-driven man pages
flopezo/tutorials-1
Tutorials on phylogenetic and phylogenomic inference
flopezo/workshops
Bioconnector Workshops