Pinned Repositories
2020hemibrain_examples
Code examples for Schlegel, Bates et al. (2020)
catbot
Slack bot to interface with CATMAID server, NBLAST and Zotero
coding-club
File sharing for the tracers' R club
dvid_tools
Python tools to query a DVID server
fancr
Support Acccess to the Female Adult Nerve Cord (FANC) Dataset
flywire_annotations
Supplemental data for Schlegel et al. (2024)
hemibrain_olf_data
Summary data on identified FIB hemibrain neurons including olfactory PNs
ol_annotations
Annotations for Drosophila Optic Lobe neurons linking the FAFB-FlyWire and Male CNS Optic Lobe datasets
tools
Overview of neuroscience tools developed in the Fly Connectomics group (University of Cambridge) and the Jefferis lab (MRC-LMB)
tracerutils
R tools for EM tracers
Drosophila Connectomics group's Repositories
flyconnectome/flywire_annotations
Supplemental data for Schlegel et al. (2024)
flyconnectome/coding-club
File sharing for the tracers' R club
flyconnectome/catbot
Slack bot to interface with CATMAID server, NBLAST and Zotero
flyconnectome/2020hemibrain_examples
Code examples for Schlegel, Bates et al. (2020)
flyconnectome/cocoa
Comparative Connectomics for Python
flyconnectome/CloudVolumeServer
Flask application to serve data via CloudVolume
flyconnectome/fancr
Support Acccess to the Female Adult Nerve Cord (FANC) Dataset
flyconnectome/ol_annotations
Annotations for Drosophila Optic Lobe neurons linking the FAFB-FlyWire and Male CNS Optic Lobe datasets
flyconnectome/ALPN_crossmatching
Data and code snippets for cross-matching olfactory PNs between FAFB (left + right) and hemibrain
flyconnectome/bigclust
Tools to visualize and annotate big clusterings
flyconnectome/flyconnectome
Profile repository
flyconnectome/tools
Overview of neuroscience tools developed in the Fly Connectomics group (University of Cambridge) and the Jefferis lab (MRC-LMB)
flyconnectome/dvid_tools
Python tools to query a DVID server
flyconnectome/hemibrain_olf_data
Summary data on identified FIB hemibrain neurons including olfactory PNs
flyconnectome/tracerutils
R tools for EM tracers
flyconnectome/2023neckconnective
Analysis to support the Neck Connective paper combining FAFB, FANC and MANC neck connective neurons
flyconnectome/bancr
An R package for querying data in the BANC dataset
flyconnectome/catmaid_server_tests
testing latency of image server
flyconnectome/fafbseg-py-media
Repository for fafbseg-py media
flyconnectome/hi-mc-examples
Data & code for the HI-MC project
flyconnectome/hnf
Documentation for the hierarchical neuron format
flyconnectome/Install_instructions
Repo for install instructions for various software and various machine types.
flyconnectome/nblast-scoremats
Collection of scoring matrices for NBLAST
flyconnectome/neuprint-python
Python client utilties for interacting with the neuPrint connectome analysis service
flyconnectome/rmushroom
flyconnectome/temca2data
Public code for Zheng, Lauritzen et al. (2017)