fmorgante's Stars
YinLiLin/CMplot
📊 Circular and Rectangular Manhattan Plot
privefl/bigsnpr
R package for the analysis of massive SNP arrays.
stephenslab/susieR
R package for "sum of single effects" regression.
Cloufield/gwaslab
A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/
MRCIEU/gwasglue
Linking GWAS data to analytical tools in R
stephenslab/mashr
An R package for multivariate adaptive shrinkage.
neurogenomics/MungeSumstats
Rapid standardisation and quality control of GWAS or QTL summary statistics
MRCIEU/gwasvcf
Reading, querying and writing GWAS summary data in VCF format
YinLiLin/hibayes
:swimmer: Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies
gabraham/plink2R
Read PLINK BED/BIM/FAM files into R
psoerensen/qgg
Statistical tools for Quantitative Genetic Analyses
cumc/bioworkflows
In-house computational biology workflows at Columbia Neurology
stephenslab/gtexresults
Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic studies with multiple conditions."
stephenslab/mvsusieR
A new model and algorithm for multivariate Bayesian variable selection regression.
stephenslab/mr.ash.alpha
An R package implementing Mr.ASH method
amalgamaria/secretariat
Clemson CHG Research Computing
stephenslab/mr.ash
R package implementing methods for multiple regression with adaptive shrinkage priors ("mr.ash").
stephenslab/mr.mash.alpha
R package implementing methods for multivariate multiple regression with adaptive shrinkage priors.
aksarkar/mtlasso