Pinned Repositories
ads1-slides
Slides for Algorithms for DNA Sequencing Coursera class
ariba
Antimicrobial Resistance Identification By Assembly
artic-noro
babraham_intro_to_r
bacterial_wgs_training
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.
BatchArtemisSRAMiner
batch virus discovery pipeline for the USYD HPC Artemis
bioinformatics_curriculum
:microscope: Path to a free self-taught education in Bioinformatics!
chewBBACA
BSR-Based Allele Calling Algorithm
UNIFESP_NTM_newspecies-nf
Paper "Description of new species of Mycobacterium terrae complex isolated from sewage at the São Paulo Zoological Park Foundation in Brazil"
NTS-in-silico-analysis
In silico analysis of virulence and antimicrobial resistance associated genes in genomes of nontyphoidal salmonella isolates from kenya
fonyambu's Repositories
fonyambu/bacterial_wgs_training
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.
fonyambu/zika-pipeline
The Zika bioinformatics pipeline
fonyambu/ariba
Antimicrobial Resistance Identification By Assembly
fonyambu/artic-noro
fonyambu/babraham_intro_to_r
fonyambu/BatchArtemisSRAMiner
batch virus discovery pipeline for the USYD HPC Artemis
fonyambu/bioinformatics_curriculum
:microscope: Path to a free self-taught education in Bioinformatics!
fonyambu/chewBBACA
BSR-Based Allele Calling Algorithm
fonyambu/UNIFESP_NTM_newspecies-nf
Paper "Description of new species of Mycobacterium terrae complex isolated from sewage at the São Paulo Zoological Park Foundation in Brazil"
fonyambu/cna_bacterial_wgs_training
In this training course you will find theory and practice material for introducing yourself to wgs analysis for foodborne bacteria
fonyambu/comp-genomics-class
Code and examples for JHU Computational Genomics class
fonyambu/Courses
fonyambu/designing.ggplots
Install Workshop Materials for Designing ggplots
fonyambu/dockerfiles
fonyambu/ena-fast-download
Download FASTQ files of reads from the European Nucleotide Archive (ENA)
fonyambu/ggplot2
An implementation of the Grammar of Graphics in R
fonyambu/github-slideshow
A robot powered training repository :robot:
fonyambu/Hello-world
trying to figure out github
fonyambu/introduction_to_bioinformatics
In this training course you will find theory and practice material for introducing yourself to the basics of high throughput sequencing data analysis.
fonyambu/learning-bioinformatics-at-home
resources for learning bioinformatics
fonyambu/NanoSim
Nanopore sequence read simulator
fonyambu/poretools
a toolkit for working with Oxford nanopore data
fonyambu/R4EPIs-website
A repository to host the landing page of the R4EPIs website
fonyambu/Roary
Rapid large-scale prokaryote pan genome analysis
fonyambu/Rstatistics_learn
fonyambu/RVDB
A reference viral database (RVDB)
fonyambu/SequencEnG
An interactive learning resource for next-generation sequencing (NGS) techniques
fonyambu/test
My First GithUB Repository
fonyambu/V-pipe
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
fonyambu/wub
Tools and software library developed by the ONT Applications group