Pinned Repositories
babraham_intro_to_r
bacterial_wgs_training
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.
bioinformatics_curriculum
:microscope: Path to a free self-taught education in Bioinformatics!
biotech_resource
some resources for startup companies
chewBBACA
BSR-Based Allele Calling Algorithm
cna_bacterial_wgs_training
In this training course you will find theory and practice material for introducing yourself to wgs analysis for foodborne bacteria
comp-genomics-class
Code and examples for JHU Computational Genomics class
Courses
UNIFESP_NTM_newspecies-nf
Paper "Description of new species of Mycobacterium terrae complex isolated from sewage at the São Paulo Zoological Park Foundation in Brazil"
NTS-in-silico-analysis
In silico analysis of virulence and antimicrobial resistance associated genes in genomes of nontyphoidal salmonella isolates from kenya
fonyambu's Repositories
fonyambu/bacterial_wgs_training
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.
fonyambu/babraham_intro_to_r
fonyambu/bioinformatics_curriculum
:microscope: Path to a free self-taught education in Bioinformatics!
fonyambu/biotech_resource
some resources for startup companies
fonyambu/chewBBACA
BSR-Based Allele Calling Algorithm
fonyambu/cna_bacterial_wgs_training
In this training course you will find theory and practice material for introducing yourself to wgs analysis for foodborne bacteria
fonyambu/comp-genomics-class
Code and examples for JHU Computational Genomics class
fonyambu/Courses
fonyambu/UNIFESP_NTM_newspecies-nf
Paper "Description of new species of Mycobacterium terrae complex isolated from sewage at the São Paulo Zoological Park Foundation in Brazil"
fonyambu/dockerfiles
fonyambu/ena-fast-download
Download FASTQ files of reads from the European Nucleotide Archive (ENA)
fonyambu/ggplot2
An implementation of the Grammar of Graphics in R
fonyambu/good-enough-practices-in-scientific-computing
Minimalist alternatives to "best practices" paper
fonyambu/hackbio2025
Hackbio coding internship
fonyambu/In-depth-NGS-Data-Analysis-Course
Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.
fonyambu/introduction_to_bioinformatics
In this training course you will find theory and practice material for introducing yourself to the basics of high throughput sequencing data analysis.
fonyambu/learning-bioinformatics-at-home
resources for learning bioinformatics
fonyambu/R4EPIs-website
A repository to host the landing page of the R4EPIs website
fonyambu/Roary
Rapid large-scale prokaryote pan genome analysis
fonyambu/TCGA_RNASeq_Clinical
fonyambu/website
fonyambu/wub
Tools and software library developed by the ONT Applications group