Pinned Repositories
aucmedi
a framework for Automated Classification of Medical Images
covid19.MIScnn
Robust Chest CT Image Segmentation of COVID-19 Lung Infection based on limited data
ensmic
An analysis on Ensemble Learning optimized Medical Image Classification with Deep Convolutional Neural Networks
GERNERMED
GERNERMED is the first open neural NER model for medical entities designed for German data.
GPTNERMED
GPTNERMED is a language model-generated, synthetic dataset and an open neural NER model for medical entities designed for German data.
MIScnn
A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
miseval
a metric library for Medical Image Segmentation EVALuation
mully
R package to create, modify and visualize graphs with multiple layers.
rBiopaxParser
Parses BioPAX files (BioPAX Version 2 and BioPAX Version 3 are supported) and represents them in R. There is quite alot of documentation available for this package. See the reference manual and the vignette for examples! If you have any questions or suggestions... DONT BE SHY! Mail me! See package description for an email address.
riadd.aucmedi
Multi-Disease Detection in Retinal Imaging based on Ensembling Heterogeneous Deep Learning Models
frankkramer-lab's Repositories
frankkramer-lab/MIScnn
A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
frankkramer-lab/miseval
a metric library for Medical Image Segmentation EVALuation
frankkramer-lab/covid19.MIScnn
Robust Chest CT Image Segmentation of COVID-19 Lung Infection based on limited data
frankkramer-lab/mully
R package to create, modify and visualize graphs with multiple layers.
frankkramer-lab/aucmedi
a framework for Automated Classification of Medical Images
frankkramer-lab/riadd.aucmedi
Multi-Disease Detection in Retinal Imaging based on Ensembling Heterogeneous Deep Learning Models
frankkramer-lab/ensmic
An analysis on Ensemble Learning optimized Medical Image Classification with Deep Convolutional Neural Networks
frankkramer-lab/GERNERMED
GERNERMED is the first open neural NER model for medical entities designed for German data.
frankkramer-lab/GPTNERMED
GPTNERMED is a language model-generated, synthetic dataset and an open neural NER model for medical entities designed for German data.
frankkramer-lab/GERNERMED-pp
GERNERMED++ is a transfer-learning-based open neural NER model for medical entities designed for German data.
frankkramer-lab/ndexr
R client library for NDEx
frankkramer-lab/RCX
R package implementing the Cytoscape Exchange (CX) format
frankkramer-lab/DrNote
DrNote is an open tagging tool for text annotation and entity linking based on OpenTapioca and WIkiData/Wikipedia. It provides an entity linking service with pre-trained data for medical annotations in multilingual settings. The processing of raw text as well as PDF by a tesseract backend is supported.
frankkramer-lab/Multipath
Integrating pathways and related knowledge in a multilayer framework
frankkramer-lab/PACS2go
Towards a Portable Research PACS for Interdisciplinary Collaboration
frankkramer-lab/DeepGleason
a System for Automated Gleason Grading of Prostate Cancer using Deep Neural Networks
frankkramer-lab/MetaRelSubNetVis
frankkramer-lab/Multipath2Neo4j
frankkramer-lab/Nursing-Quality-Indicators-in-German-FHIR-Implementations
Evaluation of the Availability of Nursing Quality Indicators in German FHIR Implementations
frankkramer-lab/FHIR-QR-Explorer
Client-based web application prototype for interactive FHIR Questionnaire Response (QR) analysis and visualization.
frankkramer-lab/ConvNeXt-UNet
frankkramer-lab/FAIR-aligned-ETL-pipeline-solution
Automated ETL pipeline for clinical study data
frankkramer-lab/Glioblastoma-Survival-Prognosis-via-Image-Classification
frankkramer-lab/KIMCare
A toolset to transfer files via the KIM component of the German Telematik-Infrastruktur using Apache NiFi.
frankkramer-lab/MISITcms
Contest Management System
frankkramer-lab/RadTA
RADiomics Trend Analysis for CT scans
frankkramer-lab/RCX-Extension-Hub
frankkramer-lab/RCX-NetworkDifferences
Extension of the RCX data model for NetworkDifferences aspects
frankkramer-lab/VisAVis
Group-wise, Comparative and Sharable Subnetwork Visualization
frankkramer-lab/WikiOntoNERCorpus
Synthetic, Annotated NER using WikiData Ontology and Wikipedia Texts, demonstrated for Medical NER