/DSI-Studio-Cloud

DSI Studio Cloud is a GitHub repository that uses GitHub's cloud computing resource to analyze diffusion MRI data. It can construct tractography and analyze its diffusion and shape metrics. The code can be extended to accomplish any command line functions provided in DSI Studio.

DSI Studio Cloud

DSI Studio Cloud is a repository that uses GitHub's cloud computing resource to process OpenNeuro diffusion MRI data and share them in the release.

DSI Studio Cloud makes use of the GitHub-hosted runner, a virtual machine hosted by GitHub, to run topup/eddy and reconstruct GQI and QSDR. The GitHub-Action scripts in the DSI Studio Cloud get data from OpenNeuro to the GitHub runners and processe them using DSI Studio.

OpenNeuro DWI Data List

Link DS ID DWI COUNT
The generality of self-control ds000009 24
UCLA Consortium for Neuropsychiatric Phenomics LA5c Study ds000030 262
Myconnectome ds000031 23
Forrest Gump ds000113 20
A test-retest fMRI dataset for motor language and spatial attention functions ds000114 20
Multisubject multimodal face processing ds000117 11
The Stockholm Sleepy Brain Study: Effects of Sleep Deprivation on Cognitive and Emotional Processing in Young and Old ds000201 76
DWI Traveling Human Phantom Study ds000206 55
Individual Brain Charting ds000244 12
NKI-sample ds001021 1
BTC_preop ds001226 36
Examining effects of arousal on responses to salient and non-salient stimuli in younger and older adults ds001242 52
SCA2 Diffusion Tensor Imaging ds001378 50
thoughtExperiment ds001419 1
BOLD5000 ds001499 2
Feature Discrimination ds001590 32
Test dataset for XCP software ds001595 1
Unilateral Glaucoma 3T dMRI ds001743 12
InterTVA. A multimodal MRI dataset for the study of inter-individual differences in voice perception and identification ds001771 40
Bilingualism and the brain ds001796 64
TheVirtualBrain Macaque MRI ds001875 9
Longitudinal Brain Correlates of Multisensory Lexical Processing in Children ds001894 113
ANT: Healthy aging and Parkinson's disease ds001907 16
Spinal Cord MRI Public Database (Multi-subjects) ds001919 236
Functional Connectivity of Music-Induced Analgesia in Fibromyalgia ds001928 40
Auditory localization with 7T fMRI ds001942 10
BTC_postop ds002080 29
Datasets with and without deliberate head movements for detection and imputation of dropout in diffusion MRI ds002087 1
Human Olfaction Without Apparent Olfactory Bulbs ds002185 22
Dense Investigation of Variability of Affect (DIVA) ds002278 2
individual_dMRI_fMRI ds002307 19
Neuroimaging predictors of creativity in healthy adults ds002330 66
3AM straight reproducibility phantoms ds002374 1
Spinal Cord MRI Public Database (Single-subject) ds002393 19
Learning Inhibitory Control and Perception ds002543 48
The Reading Brain Project L2 Adults ds002602 56
IBC ds002685 13
AOMIC-PIOP1 ds002785 211
AOMIC-PIOP2 ds002790 226
Cognitive Training ds002843 262
Social Processes Initiative in Neurobiology of the Schizophrenia(s) Traveling Human Phantoms ds003011 30
plp_nf1_dMRI_fMRI ds003027 36
SUDMEX_TMS: The Mexican dataset of an rTMS clinical trial on cocaine use disorder patients ds003037 149
DTI data from 'Fiber architecture in the ventromedial striatum and its relation with the bed nucleus of the stria terminalis' ds003047 18
AOMIC-ID1000 ds003097 925
Tidying Up White Matter: Neuroplastic Transformations in Sensorimotor Tracts following Slackline Skill Acquisition ds003138 159
Modeling an auditory stimulated brain under altered states of consciousness using the generalized ising model ds003171 17
SUDMEX_CONN: The Mexican dataset of cocaine use disorder patients ds003346 136
Ascending arousal network connectivity during recovery from traumatic coma ds003367 49
MASiVar: Multisite Multiscanner and Multisubject Acquisitions for Studying Variability in Diffusion Weighted Magnetic Resonance Imaging ds003416 169
Identification of an Amygdala-Thalamic Circuit That Acts as a Central Gain Mechanism in Taste Perception ds003424 28
dStreamUpgrade ds003495 48
VEPCON: Source imaging of high-density visual evoked potentials with multi-scale brain parcellations and connectomes ds003505 20
Language Learning Aptitude dataset ds003508 55
Data from: Comprehensive ultrahigh resolution whole brain in vivo MRI dataset as a human phantom ds003563 4
White matter deficits in cocaine use disorder V1.0 ds003599 133
A longitudinal neuroimaging dataset on language processing in children ages 5 7 and 9 years old ds003604 362
The Reading Brain Project L2 Adults ds003872 56
TractoInferno: A large-scale open-source multi-site database for machine learning dMRI tractography ds003900 284
Soma and Neurite Density MRI (SANDI) of the in-vivo mouse brain ds003959 12
The Reading Brain Project L1 Adults ds003974 52
The Reading Brain Project L2 Adults ds003988 56
Structural diffusion and rs-functional MRI data in Macaque Monkeys ds003989 3
TMS-EEG-MRI-fMRI-DWI data on paired associative stimulation and connectivity (Shirley Ryan AbilityLab, Chicago, IL) ds004024 7
A synchronized multimodal neuroimaging dataset to study brain language processing ds004078 12
An open-access accelerated adult equivalent of the ABCD Study neuroimaging dataset (a-ABCD) ds004097 40
Queensland Twin Adolescent Brain (QTAB) ds004146 718
Turone Sheep Chronic Stress (TSCS) ds004161 48
The NIMH Healthy Research Volunteer Dataset ds004215 154
Characterizing habit learning in the human brain at the individual and group levels: a multi-modal MRI study ds004299 247
Mapping neuroinflammation in vivo with diffusion-MRI in rats given a systemic lipopolysaccharide challenge ds004305 32
Rat_diffusion_STZ ds004441 28
Perinatal Stroke ds004498 7
The energetic costs of the human connectome ds004513 29
Brain Differences in Monolingual and Highly Proficient Multilingual Speakers ds004581 29
Emotion and Development Branch Phenotyping and DTI (2012-2017) ds004605 132
DTI readouts for designing a preclinical stem-cell therapy trial in experimental stroke ds004632 27
Sustaining wakefulness: Brainstem connectivity in human consciousness ds004640 2
EDDEN: Evaluation of Diffusion MRI DENoising ds004666 3
ON-Harmony: A resource for development and comparison of multimodal brain 3T MRI harmonisation approaches ds004712 80
Utilizing Amide Proton Transfer Technique to Characterise Diffuse Gliomas Based on WHO 2021 Classification of CNS Tumors ds004717 42
CS-DSI ds004737 20
White matter tract ds004742 1
White matter tract and peaks ds004744 17
language fMRI ds004765 46
Aphasia Recovery Cohort (ARC) Dataset ds004884 613
Stroke Outcome Optimization Project (SOOP) ds004889 1715
An open relaxation-diffusion MRI dataset in neurosurgical studies ds004910 134
Probability Decision-making Task with ambiguity ds004917 45
The FreeSurfer Maintenance Dataset ds004958 33
MRI dataset evaluating the effect of head down tilt 15° on cerebral perfusion in acute ischemic experimental stroke ds004962 28
Hearing loss Connectome ds005026 82
CR DBS ds005063 1
Social Reward and Aging: An Interim Multi-echo fMRI and Diffusion Dataset ds005123 108
Sequence test for multiband DWI and magnetization transfer sequence ds005134 1
BOLD variability during cognitive control for an adult lifespan sample ds005270 153
Maternal Brain Project ds005299 25