/training-ea

Training material for East Accord

Primary LanguageHTML

15th Dec 09:00 openEHR workshop Session 2

Agenda

East Accord: openEHR Training Session Two 15th December 2020

Topic Dtn. Start End
openEHR Archetype classes 45 09:00 09:45
Break 10 09:45 09:55
Mindmap modelling smoking breakout 45 09:55 10:40
Break 10 10:40 10:50
Modelling governance 45 10:50 11:35
Break 5 11:35 11:40
Questions/ issues 20 11:40 12:00
Technical - API / Archetyping Smoking 50 12:00 12:50
Questions/ issues 10 12:50 13:00

Mindmapping Smoking - Getting started

  1. Use any mind-mapping software of your choice - we tend it to use Xmind

  2. As a group, take about 25 minutes to develop a maximal dataset for 'smoking status'

Use this image as a start point

  1. Rejoin the main channel and we will compare notes with the other group, and look at examples from the

Modelling Smoking - Getting started

  1. Open a web browser – Chrome or Firefox are best

  2. Go to https://tools.openehr.org/designer (Best if you open this link in a new tab).

  3. Login: freshehr_training Password: ad4freshtraining

  4. Create a new EVALUATION archetype for 'smoking_status' and see how much of the mindmap you can correctly model.

Technical Intro

You may find this document helpful as a follow-up to the brief Technical Intro. We will cover the Technical aspects in more depth in the next training event.

https://freshehr.github.io/dhi-proms/

Download Postman artefacts

Run in Postman

ehrscapeBaseUrl: https://cdr.code4health.org/rest/v1

openehrBaseUrl: https://cdr.code4health.org/rest/openehr/v1

https://cdr.code4health.org/studio

A. List templates and upload a new template

https://freshehr.github.io/dhi-proms/cdr/ehrscape/ECDR2-openehr-templates/

B. Create new EHR - register a patient with the CDR

https://freshehr.github.io/jmohw-cdr/opencdr/OCDR5-creating-an-ehr/

C. Retrieve the patient's ehrId from their subjectID (NHS Number)

https://freshehr.github.io/dhi-proms/cdr/ehrscape/ECDR5-retrieving-an-ehrId/

D. Get an example template

curl --location --request GET 'https://cdr.code4health.org/rest/v1/template/JMOHW - Passport observations.v0/example?format=FLAT&exampleFilter=OUTPUT' \
--header 'Content-Type: application/json' \
--header 'Authorization: {{Authorization}}'

E. Commit a composition

https://freshehr.github.io/dhi-proms/dhis/DHIS6-committing-proms-data/

F. Update a composition

https://freshehr.github.io/dhi-proms/dhis/DHIS8-updating-proms-data/

G. Run a query

https://freshehr.github.io/dhi-proms/dhis/DHIS5-querying-proms-data/

Further reading

General Information:

openEHR website: https://www.openehr.org/

openEHR videos and presentations: https://www.youtube.com/c/openehr/featured

openEHR Discourse (discussion forum): https://discourse.openehr.org/

What is openEHR? - Introduction: https://www.openehr.org/about/what_is_openehr

openEHR Zotero library: https://www.zotero.org/libraries

Clinical Knowledge Managers (CKMs) - archetype repositories and governance tools:

International CKM: https://ckm.openehr.org/ckm/

Apperta CKM (UK): https://ckm.apperta.org/ckm/

Social Care Examples:

Social Care Project on Apperta CKM: https://ckm.apperta.org/ckm/projects/1051.61.50 A repository for the social care related archetypes and templates that we have been working on for various use cases Care Home Dataset template: https://ckm.apperta.org/ckm/templates/1051.57.273

Based on the care home data inventory described in a recent paper by Lucy Johnston et al from Edinburgh Napier University, which is available here: https://www.medrxiv.org/content/10.1101/2020.08.17.20176503v2

The original data inventory is shown below, along with another care home dataset that we have used as an example in our data models.