Pinned Repositories
bayesian-matrix-population-model
A Bayesian approach to size-structured matrix population model to estimate daily rates of phytoplankton cell division, growth and respiration
Bayesian-matrixmodel
Size-structured matrix population model for Prochlorococcus
bayesian_cbiomes
notebooks and files for the Bayesian CBIOMES workshop
FCSplankton
An R packages to gate populations of interest from flow cytometry data (.fcs)
flowPhyto
flowPhyto is a package for the R statistical programming language that uses automated computational methods (flowClust and flowMeans) to cluster phytoplankton populations, perform aggregate statistics and create maps of phytoplankton distribution from georeferenced flow cytometry data. For more details, see Ribalet, F., Schruth, D., and Armbrust, E.V. 2011. flowPhyto: enabling automated analysis of microsccopic algae from continuous flow cytometric data. Bioinformatics 27:732-733
markdown-cv
a simple template to write your CV in a readable markdown file and use CSS to publish/print it.
mie-theory
ssPopModel
Size-structured matrix population model for SeaFlow data
statistics-introduction
This began as the textbook for Intermediate Statistics (Math 325) at BYU-Idaho. It aims to become a personal notebook for performing and interpreting statistical analyses in R. Contributions and ideas for improvement are welcome.
popcycle
Popcycle is an R package that offers reproducible analytical tools to analyze flow cytometry data collected by SeaFlow
fribalet's Repositories
fribalet/Bayesian-matrixmodel
Size-structured matrix population model for Prochlorococcus
fribalet/FCSplankton
An R packages to gate populations of interest from flow cytometry data (.fcs)
fribalet/flowPhyto
flowPhyto is a package for the R statistical programming language that uses automated computational methods (flowClust and flowMeans) to cluster phytoplankton populations, perform aggregate statistics and create maps of phytoplankton distribution from georeferenced flow cytometry data. For more details, see Ribalet, F., Schruth, D., and Armbrust, E.V. 2011. flowPhyto: enabling automated analysis of microsccopic algae from continuous flow cytometric data. Bioinformatics 27:732-733
fribalet/ssPopModel
Size-structured matrix population model for SeaFlow data
fribalet/mie-theory
fribalet/bayesian_cbiomes
notebooks and files for the Bayesian CBIOMES workshop
fribalet/markdown-cv
a simple template to write your CV in a readable markdown file and use CSS to publish/print it.
fribalet/personal-website
my personal homepage
fribalet/psd-similarity
Compute similarity among a set of cytograms
fribalet/statistics-introduction
This began as the textbook for Intermediate Statistics (Math 325) at BYU-Idaho. It aims to become a personal notebook for performing and interpreting statistical analyses in R. Contributions and ideas for improvement are welcome.