fruce-ki

Bioinformatician

NeurolentechKlosterneuburg, Austria

Pinned Repositories

KF_arabidopsis-GRNA
The scripts bundle included with the manuscript.
Language:Perl1 5 00
RATS
Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.
Language:R32 8 591
utility_scripts
A collection of code by me and for me
Language:Python2 1 40
differentialabundance
Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
Language:Nextflow66 150 18340
rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Language:Nextflow943 157 674713
CaTCH
Analysis code for CaTCH barcoding experiments.
Language:Python3 5 30
IgH_VDJ_MutPE
Language:Python2 4 01
IgH_VDJ_PROcapseq
Language:Python1 5 01
crispr-process-nf
Process CRISPR and shRNA functional genetic screening data
Language:Nextflow3 3 11

fruce-ki/utility_scripts
A collection of code by me and for me
Language:Python2 1 40