time to run signalp6/6.0h

Question

time to run signalp6/6.0h

Alecrim24 opened this issue a year ago · 1 comments

Alecrim24 commented a year ago

Hi there,

im running this software as part of a workflow to eventually generate a trinotate.xls.

However the issue im facing is time. My script has been running for 4 days and a bit and the max is 7 days.

is there a way to do this in sections so it can continue running

or

if i submit the script again will it be able to remember where it left from and continue.

kind regards

George

Answer 1 · 2023-10-13T16:57:41.000Z

Hi,
I don't know about your script and workflow, so can't really comment on that. How big is your job? I would recommend using GPUs for large jobs as it's much faster.

If you cancel a signalp6 command it will not restart from where it was. The best way to split large jobs is to make multiple input fasta files and predict them one by one.