Pinned Repositories
CapR
CapR calculates probabilities that each RNA base position is located within each secondary structural context for long RNA sequences.
FAB-GMM
FAB-GMM estimates Gaussian Mixture Model (GMM) parameter based on Factorized Asymptotic Bayes (FAB) algorithm.
Ipm
LinAliFold-CentroidLinAliFold
LogicomeProfiler
Logicome Profiler exhaustively detects statistically significant triplet logic relationships from a binary matrix dataset.
Mirage
Mirage is ancestral genome estimation software by considering different evolutionary patterns among gene families.
RIblast
RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome analysis
RIblast_pv
RIblast_pv is a statistical significance assessment method for RNA-RNA interaction in long RNAs.
fukunagatsu's Repositories
fukunagatsu/RIblast
RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome analysis
fukunagatsu/CapR
CapR calculates probabilities that each RNA base position is located within each secondary structural context for long RNA sequences.
fukunagatsu/FAB-GMM
FAB-GMM estimates Gaussian Mixture Model (GMM) parameter based on Factorized Asymptotic Bayes (FAB) algorithm.
fukunagatsu/LinAliFold-CentroidLinAliFold
fukunagatsu/Mirage
Mirage is ancestral genome estimation software by considering different evolutionary patterns among gene families.
fukunagatsu/Ipm
fukunagatsu/LogicomeProfiler
Logicome Profiler exhaustively detects statistically significant triplet logic relationships from a binary matrix dataset.
fukunagatsu/RIblast_pv
RIblast_pv is a statistical significance assessment method for RNA-RNA interaction in long RNAs.