Pinned Repositories
bmrm
Fork of the bmrm project (http://users.cecs.anu.edu.au/~chteo/BMRM.html) for structured learning on linearly constraint linear models.
conv4d
4D Convolution Operator for TensorFlow
mala
Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).
nyroglancer
jupyter notebook extension to visualize numpy arrays with the neuroglancer
pipeline
a simple to use C++ pipeline architecture
pylp
Unified python wrappers for popular ILP solvers
recept
Pen event interception for line smoothing on the reMarkable 2 tablet
sopnet
neuron reconstruction pipeline
unproof
Script to unscramble proofpoint's urldefense URLs
waterz
Simple watershed and agglomeration library for affinity graphs.
funkey's Repositories
funkey/recept
Pen event interception for line smoothing on the reMarkable 2 tablet
funkey/conv4d
4D Convolution Operator for TensorFlow
funkey/nyroglancer
jupyter notebook extension to visualize numpy arrays with the neuroglancer
funkey/waterz
Simple watershed and agglomeration library for affinity graphs.
funkey/mala
Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).
funkey/unproof
Script to unscramble proofpoint's urldefense URLs
funkey/pylp
Unified python wrappers for popular ILP solvers
funkey/augment
Simple elastic augmentation for ND arrays
funkey/cmake
module-based cmake build system
funkey/solvers
Wrapper classes for Gurobi, CPLEX, and SCIP ILP and IQP solvers
funkey/brembow_experiments
funkey/DenoiSeg
Joint training of denoising and segmentation.
funkey/flywing
Scripts to train and evaluate tracking of developing flywing cells
funkey/quemono
Learn to write a computer game in 88 days
funkey/resync
A FUSE client for the reMarkable tablet
funkey/zarr
An implementation of chunked, compressed, N-dimensional arrays for Python.
funkey/00_boot
funkey/arthurs_problem
funkey/centrosome_experiments
funkey/comatch
Bi-partite matching of nodes to minimize component split/merge errors
funkey/das_rrr
Interactive Tutorial to Reduced Rank Regression
funkey/funkey.github.io
My personal website.
funkey/gurobi-conda
Conda recipe for the Gurobi solver
funkey/luigi_tutorial
Short luigi tutorial covering creation of Tasks and Targets, parallel processing, and fault tolerance
funkey/mtrack_experiments
Experiment scripts for the mtrack project
funkey/neuromatch_xai
funkey/numcodecs
A Python package providing buffer compression and transformation codecs for use in data storage and communication applications.
funkey/organ_seg
funkey/pylp-conda
Metainformation to build the pylp module as a conda package.
funkey/scip-conda