Pinned Repositories
ARGminer
Curation of Antibiotic Resistance Genes by using crowdsourcing
argpore-cli
Client Serive of ARGpore pipeline for the analysis of antibiotic resistance in nanopore reads
basic_rest_ts
Basic rest API using node js and express with typescript
deeparg
A deep learning based approach to predict Antibiotic Resistance Genes (ARGs) from metagenomes. It provides two models,deepARG-SS and deepARG-LS.
deeparg2.0
deepARG using deep semantic representation
deepGene
gene expression optimization
ExtrARG
Extract discriminatory ARGs from metagenomics samples
MetaStorm
MetaStorm: A public webservice for the analysis and annotation of short sequence reads metagenomes
pytorch-pretrained-BERT
📖The Big-&-Extending-Repository-of-Transformers: Pretrained PyTorch models for Google's BERT, OpenAI GPT & GPT-2, Google/CMU Transformer-XL.
sentiment_analysis
Sentiment analysis using LSTM deep learning for spanish sentences
gaarangoa's Repositories
gaarangoa/deeparg
A deep learning based approach to predict Antibiotic Resistance Genes (ARGs) from metagenomes. It provides two models,deepARG-SS and deepARG-LS.
gaarangoa/deeparg2.0
deepARG using deep semantic representation
gaarangoa/ARGminer
Curation of Antibiotic Resistance Genes by using crowdsourcing
gaarangoa/ExtrARG
Extract discriminatory ARGs from metagenomics samples
gaarangoa/MetaStorm
MetaStorm: A public webservice for the analysis and annotation of short sequence reads metagenomes
gaarangoa/pytorch-pretrained-BERT
📖The Big-&-Extending-Repository-of-Transformers: Pretrained PyTorch models for Google's BERT, OpenAI GPT & GPT-2, Google/CMU Transformer-XL.
gaarangoa/transformer_classifier
Transfomer encoder architecture used only for classification.
gaarangoa/nanoARG
antibiotic resistance profiling of nanopore reads
gaarangoa/containers
gaarangoa/deepContigMerger
gaarangoa/deepspeech.pytorch
Speech Recognition using DeepSpeech2.
gaarangoa/embedding-projector-standalone
gaarangoa/fastText
Library for fast text representation and classification.
gaarangoa/genomic-scripts
This repository contains simple scripts for genomics/metagenomics data analysis
gaarangoa/GRiD
Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at ultra-low sequencing coverage (> 0.2x).
gaarangoa/heading_generator
generate news-like headings from tweets using seq2seq
gaarangoa/igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
gaarangoa/litgpt
20+ high-performance LLMs with recipes to pretrain, finetune and deploy at scale.
gaarangoa/metaMLP
MetaMLP is a fast approach to annotate metagenomic datasets against a protein reference database
gaarangoa/MOD
Multiple Object Detection with tensorflow
gaarangoa/model_search
gaarangoa/PBintegrall
gaarangoa/pyStarSpace
Python wrapper for StarSpace
gaarangoa/samecode
Code that I use all the time everywhere
gaarangoa/samv2
CPU compatible fork of the official SAMv2 implementation aimed at more accessible and documented tutorials
gaarangoa/StarSpace
Learning embeddings for classification, retrieval and ranking.
gaarangoa/tensorboard
TensorFlow's Visualization Toolkit
gaarangoa/tfjs-models
Pretrained models for TensorFlow.js
gaarangoa/tfjs-yolo-tiny
In-Browser Object Detection using Tiny YOLO on Tensorflow.js
gaarangoa/viralMetagenomics