gadget-framework/gadget3

Issues

• g3a_report_detail has abundance/weight reported early

  #200 opened a month ago by lentinj
  1

• weightJones: max vs realised consumption

  #198 opened a month ago by vbartolino
  1

• Blubber thickness likelihood component

  #175 opened 4 months ago by lentinj
  37

• Grouping time-varying parameters

  #197 opened 2 months ago by bthe
  1

• Random effects not reported properly

  #195 opened 2 months ago by bthe
  6

• Projections: Catch data

  #171 opened 5 months ago by lentinj
  9

• Move g3a_trace_nan, modern model debugging vignette

  #164 opened 5 months ago by lentinj
  2

• g3_suitability_andersenfleet not using maximum of stock lengths

  #188 opened 2 months ago by lentinj
  0

• Clashing g3_param_table g3_param ("haddock problem")

  #167 opened 2 months ago by lentinj
  1

• Random-effect spawning / simulations

  #168 opened 3 months ago by lentinj
  1

• Weightloss action

  #174 opened 3 months ago by lentinj
  10

• Absolute weightloss on fertility

  #177 opened 3 months ago by lentinj
  0

• Combined g3_param_table / g3l_random_dnorm()

  #181 opened 4 months ago by lentinj
  5

• Likelihood distribution aggregating over multiple years / decades

  #129 opened a year ago by lentinj
  2

• list_to_stock_switch() means we can't use sub-formulas in suitability definitions

  #160 opened 3 months ago by lentinj
  2

• Seasonal / time-based selectivity

  #166 opened 3 months ago by lentinj
  0

• Blubber thickness -> fertility link

  #176 opened 4 months ago by lentinj
  1

• Surplus production models in place of otherfood

  #169 opened 5 months ago by lentinj
  5

• equivalent to prey aggregation file

  #162 opened 5 months ago by vbartolino
  10

• Look at spawning model in stock synthesis

  #136 opened 4 months ago by lentinj
  1

• g3_parameterized by_area = TRUE

  #153 opened 5 months ago by lentinj
  1

• Projection reports

  #170 opened 5 months ago by lentinj
  0

• Expose array descriptions

  #165 opened 5 months ago by lentinj
  0

• Combining lists of actions & single actions results in a mess

  #157 opened 5 months ago by lentinj
  2

• Switch to TMBad by default

  #161 opened 5 months ago by lentinj
  1

• Predation vignette, featuring otherfood

  #163 opened 5 months ago by lentinj
  1

• Resolve formula dependency ordering in add_dependent_formula

  #156 opened 5 months ago by lentinj
  0

• Predation likelhood - scsimple StomachContent

  #159 opened 5 months ago by lentinj
  5

• Predation likelhood - g3l_distribution_stockratio_dirichlet

  #148 opened 7 months ago by lentinj
  7

• Predation - consumption-dependant Growth (WeightJones / MULTSPEC)

  #158 opened 6 months ago by lentinj
  1

• Predation - Otherfood equivalent

  #155 opened 6 months ago by lentinj
  7

• Predation selectivity reporting

  #152 opened 6 months ago by lentinj
  8

• Predation likelihood

  #154 opened 6 months ago by lentinj
  1

• g3a_naturalmortality error when restricted age

  #149 opened 7 months ago by vbartolino
  2

• Spawning into multiple stocks not splitting evenly

  #147 opened 7 months ago by lentinj
  9

• aggregate data before array-ifying in g3l_likelihood_data

  #120 opened a year ago by lentinj
  3

• Integrated reporting

  #131 opened 9 months ago by lentinj
  16

• error with age-based index

  #142 opened 9 months ago by vbartolino
  3

• Vignette: Introduction to gadget3 & key concepts

  #132 opened 10 months ago by lentinj
  8

• g3a_report not compatible with g3a_trace_nan

  #130 opened 10 months ago by lentinj
  1

• g3_optim: Move from gadgetutils

  #135 opened a year ago by lentinj
  0

• Vignette dedicated to observation data fomatting

  #126 opened a year ago by lentinj
  0

• Perfomance: Removing age looping / order of stock dimensions

  #134 opened a year ago by lentinj
  0

• g3_init_guess migration / replacement

  #124 opened a year ago by lentinj
  7

• g3a_report_detail error

  #125 opened a year ago by MikkoVihtakari
  4

• g3a_renewal_vonb_t0: t0 cannot equal an age

  #128 opened a year ago by lentinj
  5

• g3a_initialconditions_normalcv

  #123 opened a year ago by lentinj
  2

• run_tmb filename hash should include compiler args?

  #122 opened a year ago by lentinj
  0

• Remove sparseMatrix support, Matrix dependency

  #121 opened a year ago by lentinj
  2

• g3_parameterized()-based defaults

  #118 opened a year ago by lentinj
  9