Pinned Repositories
123D
advent2021
my solutions for Advent of Code 2021
aoc-2022
aoc-2023
bioxsd
a repository for all things bioXSD (The Bioinformatics Lab 2013, TU Munich)
comandos
Advanced visualizations for the comparison of single-cell datasets. Conceived as a SAMap add-on, but does not require it.
plit-genome
The scripts and pipelines for the P. litorale draft genome assembly (DOI: 10.5281/zenodo.14188290)
tina
tina is no acronym
ue300164
2023S 300164-1 Advanced bioinformatic analysis of single-cell data
prosstt
PRObabilistic Simulations of ScRNA-seq Tree-like Topologies
galicae's Repositories
galicae/bioxsd
a repository for all things bioXSD (The Bioinformatics Lab 2013, TU Munich)
galicae/comandos
Advanced visualizations for the comparison of single-cell datasets. Conceived as a SAMap add-on, but does not require it.
galicae/plit-genome
The scripts and pipelines for the P. litorale draft genome assembly (DOI: 10.5281/zenodo.14188290)
galicae/tina
tina is no acronym
galicae/advent2021
my solutions for Advent of Code 2021
galicae/aoc-2022
galicae/aoc-2023
galicae/cheapopore
Reverse-engineering the Brickopore sequencing project with Arduino and non-LEGO
galicae/comandos-paper
A small paper that describes the code and ideas behind https://github.com/galicae/comandos
galicae/Easy_HCR
Automated blasting and easy probe design for Hybridization Chain Reaction v3
galicae/GAAS
Genome Assembly and Annotation Service code
galicae/gitignore
A collection of useful .gitignore templates
galicae/gobi-gotoh
galicae/ue300164
2023S 300164-1 Advanced bioinformatic analysis of single-cell data
galicae/diopy
The single-cell data IO between R and Python(Python version)
galicae/genome_assembly_pipelines
A collection of snakemake scripts to streamline genome annotation
galicae/insitu_probe_generator
Generate HCR-style Probe Pairs for mRNA visualization
galicae/kabsch
galicae/pdum-genome
A community-curated GFF file for the _Platynereis dumerilii_ genome.
galicae/planets
Wolfman and Dracula's planetary lander project
galicae/recipes
galicae/rosalind
galicae/RSG
Webpage development for RSG-Germany
galicae/SAMap
SAMap: Mapping single-cell RNA sequencing datasets from evolutionarily distant organisms.
galicae/scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
galicae/scGAE
single-cell graph autoencoder
galicae/self-assembling-manifold
The Self-Assembling-Manifold (SAM) algorithm.
galicae/UE300149-thomas
galicae/wengan
An accurate and ultra-fast hybrid genome assembler
galicae/zoombox