gangwug

Pinned Repositories

drawCirHeatmap
The code of drawing the heatmap of rhythmical profiles of circadian-omics data
Language:R10
impute
A github copy of impute package from Bioconductor
Language:Fortran21
limma
A github copy of limma package from Bioconductor
Language:R41
LTMPy
An in silico genome-wide screen for circadian clock strength (A python version)
Language:Python10
LTMR
An in silico genome-wide screen for circadian clock strength
Language:R20
MetaCycle
An integrated R package to evaluate periodicity in large scale data
Language:R26 7 1215
MetaCycleApp
A web application for MetaCycle
Language:R30
Oslops
Combine the pipeline of CYCLOPS and Oscope for ordering human sampls
Language:Julia10
preOslops
the revised CYCLOPS pipeline used for ordering human skin samples
Language:Julia3 2 10
SRBR_SMTSARworkshop2016
Statistical Methods for Time Series Analysis of Rhythms Workshop in 2016 SRBR Meeting
Language:R4 3 00

gangwug's Repositories

gangwug/MetaCycle
An integrated R package to evaluate periodicity in large scale data
Language:R26 7 1215
gangwug/limma
A github copy of limma package from Bioconductor
Language:R41
gangwug/SRBR_SMTSARworkshop2016
Statistical Methods for Time Series Analysis of Rhythms Workshop in 2016 SRBR Meeting
Language:R4 3 00
gangwug/MetaCycleApp
A web application for MetaCycle
Language:R30
gangwug/preOslops
the revised CYCLOPS pipeline used for ordering human skin samples
Language:Julia3 2 10
gangwug/impute
A github copy of impute package from Bioconductor
Language:Fortran21
gangwug/LTMR
An in silico genome-wide screen for circadian clock strength
Language:R20
gangwug/drawCirHeatmap
The code of drawing the heatmap of rhythmical profiles of circadian-omics data
Language:R10
gangwug/LTMPy
An in silico genome-wide screen for circadian clock strength (A python version)
Language:Python10
gangwug/Oslops
Combine the pipeline of CYCLOPS and Oscope for ordering human sampls
Language:Julia10
gangwug/SkinClockApp
This app shows time-series expression of five clock genes in epidermis samples collected from 19 subjects
Language:R1
gangwug/SkinPhaserApp
SkinPhaser app
Language:R10
gangwug/waveclock
Time-frequency analysis of cycling cell luminescence data (Tom Price's R package)
Language:R10
gangwug/affyArrayExp
The general pipeline of extracting expression values from microarray cel files
00
gangwug/CCMapp
The shiny app of drawing the heatmap of clock correlation matrix
Language:R
gangwug/distanceCor
Perform permutation-test of distance correlation coefficient
Language:R
gangwug/geneOverlapApp
get the overlapped genes between two gene lists
Language:R
gangwug/mantel_test_py
A python version of mantel test
Language:Python
gangwug/MetaCycleV100
MetaCycle version 1.0.0
Language:R
gangwug/nCV
Evaluate clock robustness in population scale data
Language:R
gangwug/nCVapp
The shiny app for nCV package
Language:R
gangwug/nCVPy
The python version of nCV package
Language:Python
gangwug/pathview
pathway based data integration and visualization
gangwug/perlExamples
Several examples of perl scripts
Language:Perl
gangwug/runGSEA
A shiny app of performing GSEA analysis using fgsea package
Language:R
gangwug/runWaveClock
This repository contains the demo files of running WaveClock
Language:R1
gangwug/SRBR_SMTSARworkshop2018
Statistical Methods for Time Series Analysis of Rhythms Workshop in 2018 SRBR Meeting
Language:R
gangwug/test
test git on different computers
Language:HTML2 0
gangwug/twoWayANOVA
Two-way ANOVA analysis example
Language:R
gangwug/vrFamilyNet
vrFamilyNet