gaoce
Bioinformatics, computational Biology. Immunology, infectious diseases. Instructor at HMS, investigator at BWH.
Boston, MA
Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
Biostrings
Efficient manipulation of biological strings
CC
A MATLAB app for conducting consensus clustering.
cookiecutter-combio
A general cookiecutter template for reproducible computational biology project.
CPCA
MATLAB app for CPCA (common principal component analysis)
dist_matrix
Get distance matrix among addresses using goolge maps api
parafac_gui
A GUI to conduct PARAFAC for spectroscopy data.
pubmed_network
Given a keyword, search PubMed and construct a citation network
tensor_decomposition
A project to decompose 3D tensor for gene expression time series data.
TimeVis
A visualization tool to visualize gene expression time series data.
gaoce's Repositories
gaoce/pubmed_network
Given a keyword, search PubMed and construct a citation network
gaoce/parafac_gui
A GUI to conduct PARAFAC for spectroscopy data.
gaoce/cookiecutter-combio
A general cookiecutter template for reproducible computational biology project.
gaoce/CPCA
MATLAB app for CPCA (common principal component analysis)
gaoce/tensor_decomposition
A project to decompose 3D tensor for gene expression time series data.
gaoce/TimeVis
A visualization tool to visualize gene expression time series data.
gaoce/bioconda-recipes
Conda recipes for the bioconda channel.
gaoce/Biostrings
Efficient manipulation of biological strings
gaoce/CC
A MATLAB app for conducting consensus clustering.
gaoce/dist_matrix
Get distance matrix among addresses using goolge maps api
gaoce/do_utils
Some utilities to manage DigitalOcean droplets.
gaoce/dpcR
Analysis, visualisation and simulation of digital PCR experiments.
gaoce/GenomicAlignments
Representation and manipulation of short genomic alignments
gaoce/haskell_99
My exercise on 99 Haskell Problems
gaoce/ifttt
gaoce/microplateReader
gaoce/ngs-tools
Tools related to next generation sequencing analysis.
gaoce/parafac_gene
A MATLAB app for applying PARAFAC models to gene expression time series data.
gaoce/pubnet
gaoce/raddins
A repo for some rstudio addins
gaoce/remotenotebook
Blog
gaoce/subgit
Download a sub folder or file from a repository on github.com
gaoce/tcga_data
Collect and parse TCGA data for future use.