ERROR | __main__:main:115 - The database directory was unsuccessfully checked. Please run install_databases.py.
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ZaeemBIo commented
- pharokka version: 1.5.1
- Python version: 3.10
- Operating System: linux mint
Description
trying to install database. did install it. but when i run
pharokka.py -i '/home/ryujin/Desktop/ForBRIG/Prophageregion.fna' -o '/home/ryujin/Desktop/pharokka' -f -t 20
it shows
ERROR | main:main:115 - The database directory was unsuccessfully checked. Please run install_databases.py.
i installed databases , even manually downloaded and specified the path.
pharokka.py -i '/home/ryujin/Desktop/ForBRIG/Prophageregion.fna' -o '/home/ryujin/Desktop/pharokka' -d '/home/ryujin/Desktop/Softwares/pharokka_v1.4.0_databases' -t 20
What I Did
downloaded pharokka 1.5.1 using mamba and biconda.