/BioC2020

BioC2020: Where Software and Biology Connect

This repository contains material for the Bioconductor annual conference. View the conference web site.

Edit or add material as markdown files in the docs/ directory. Please wrap lines to 80 character width and aim for simple markdown rather than elaborate html or other content.

Please follow best practices by previewing changes locally.

  1. Make sure that ruby and bundler are installed, following the 'Requirements' section of GitHub's documentation.

  2. Clone the repository and switch to the docs/ directory

     cd BioC2020/docs

  3. Install or update bundler to install the ruby pre-requisities.

     gem install --user-install bundler # this will require to export the PATH to run the other commands
 gem install  bundler # needs sudo

  4. Install ruby pre-requisites.

     bundle install --path vendor/bundle     # once only; references Gemfile
 # If the installer complains, add the suggested $PATH_TO_RUBY/bin
 # $HOME/.gem/ruby/2.3.0/bin/bundle
 # directory to your ~/.bash_profile or ~/.bashrc or similar.

  5. Execute the jekyll server

     bundle exec jekyll serve

    and view the results at https://localhost:4000