Pinned Repositories
amatmacro
amatmacro website
edinbr-talks
Slides or talk notes from EdinbR meetings
ENCODE-TFBS-replicate-quality
R code for "Variable reproducibility in genome-scale public data: A case study using ENCODE ChIP sequencing resource" article, submited to FEBS letter.
encodeRNAseqPariwiseCorrelation
scatterplots and PCC from ENCODE RNAseq
HeatStarSeq_gh
A R/shiny web application to browse and compare public RNA-seq / ChIP-seq / CAGE datasets
Interactive-heatmap-with-R
R shiny application comparing performance of d3heatmap and plot.ly heatmap
liver_mouse_rat
R script for analysis of Mouse and Rat liver microarray data
perepigenomicsAnalysis
Data analysis part of the PEREpigenomics web-app
R_future_Edinbr_Presentation
Presentation of the R package future, for EdinbR
rnaseq-vizfada
gdevailly's Repositories
gdevailly/HeatStarSeq_gh
A R/shiny web application to browse and compare public RNA-seq / ChIP-seq / CAGE datasets
gdevailly/Interactive-heatmap-with-R
R shiny application comparing performance of d3heatmap and plot.ly heatmap
gdevailly/R_future_Edinbr_Presentation
Presentation of the R package future, for EdinbR
gdevailly/ENCODE-TFBS-replicate-quality
R code for "Variable reproducibility in genome-scale public data: A case study using ENCODE ChIP sequencing resource" article, submited to FEBS letter.
gdevailly/liver_mouse_rat
R script for analysis of Mouse and Rat liver microarray data
gdevailly/perepigenomicsAnalysis
Data analysis part of the PEREpigenomics web-app
gdevailly/rnaseq-vizfada
gdevailly/amatmacro
amatmacro website
gdevailly/edinbr-talks
Slides or talk notes from EdinbR meetings
gdevailly/encodeRNAseqPariwiseCorrelation
scatterplots and PCC from ENCODE RNAseq
gdevailly/OLGtron
Une application R/Shiny pour calculer votre niveau d'embourgeoisement.
gdevailly/frrrenchies
Liste de ressources R utiles pour les Français
gdevailly/gdevailly.github.io
gdevailly/hackaviz_tlse2018
hackaviz 2018 du groupe Toulouse Dataviz.
gdevailly/IsoformSwitchAnalyzeR
An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)
gdevailly/lettercase
Utilities for turning characters into various cases: camelCase, Title Case, lower case, upper case, etc.
gdevailly/mappability_of_tad_borders
Inverstigating the genomic mappability of TAD borders
gdevailly/meetingsR
A list of R conferences and user groups
gdevailly/methylseq
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
gdevailly/monnaiemoderne
source pour le blog Monnaie moderne
gdevailly/oitis_array_analysis
Rscripts for gene expression array anaysis of otitis media with effusion samples
gdevailly/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
gdevailly/rug-toulouse-website
R Toulouse Website
gdevailly/rweekly.org
R Weekly
gdevailly/scater
Clone of the Bioconductor repository for the scater package, see https://bioconductor.org/packages/devel/bioc/html/scater.html for the official development version.
gdevailly/scFeatureFilter
gdevailly/seqplots
SeqPlots - An interactive tool for visualizing NGS signals and sequence motif densities along genomic features using average plots and heatmaps.
gdevailly/siteperso
Source for personal website
gdevailly/tidynomicon
The Tidynomicon: An Introduction to R for Data Engineers and Others