Pinned Repositories
armatus-1
bai
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
cloudbiolinux
CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
cromwell-wdl-vscode
ensemble-community
ensemble-community is a small project that provides C and R-project interfaces for community detection with ensemble-based algorithms. These methods are intended to interface with the igraph package.
growcode
A non-parametric framework for learning network growth models
ScalaA
Awesome utilities for an awesome language
wrap-lines
Wrap-lines package for Atom
geetduggal's Repositories
geetduggal/growcode
A non-parametric framework for learning network growth models
geetduggal/ScalaA
Awesome utilities for an awesome language
geetduggal/wrap-lines
Wrap-lines package for Atom
geetduggal/ensemble-community
ensemble-community is a small project that provides C and R-project interfaces for community detection with ensemble-based algorithms. These methods are intended to interface with the igraph package.
geetduggal/cromwell-wdl-vscode
geetduggal/armatus-1
geetduggal/bai
geetduggal/bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
geetduggal/cloudbiolinux
CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
geetduggal/cnvkit-dnanexus
DNAnexus app for CNVkit
geetduggal/cwltool
Common Workflow Language reference implementation
geetduggal/dockdx
geetduggal/dockstore-test
geetduggal/dx-toolkit
DNAnexus platform client libraries
geetduggal/dxda
CLI tool to manage the download of large quantities of files from DNAnexus
geetduggal/dxWDL
Workflow Definition Language compiler for DNAnexus platform
geetduggal/gatsby-starter-default
geetduggal/geetduggal.github.io
geetduggal/jekyll-base
geetduggal/nim-stash
geetduggal/pfda2dockstore
Export precisionFDA apps to Dockstore
geetduggal/public-notes
Just a simple repo to track some of my thoughts without a lot of overhead.
geetduggal/refdetect
Simple python module for reference file detection on the DNAnexus platform
geetduggal/SalmonBlogResponse
Response to blog post about Salmon
geetduggal/test-documentation
Testing out netlify
geetduggal/test_bcbio_cwl
Test workflows, run scripts and data for bcbio Common Workflow Language integration
geetduggal/typora-github-dark
A dark version of the typora's github theme