/deeptime

Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation

Primary LanguagePythonGNU Lesser General Public License v3.0LGPL-3.0

deeptime

License: LGPL v3 Build Status codecov

Releases:

Installation via conda recommended.

conda-forge PyPI
conda install -c conda-forge deeptime pip install deeptime

Documentation: deeptime-ml.github.io.

Building the latest trunk version of the package:

Using conda for dependency management and python setup.py:

git clone https://github.com/deeptime-ml/deeptime.git

cd deeptime
git submodule update --init

conda install numpy scipy cython scikit-learn pybind11

python setup.py install

Or using pip:

pip install git+https://github.com/deeptime-ml/deeptime.git@main