gerard-ompad
Computational Statistics | Nonparametric Statistics | Tropical Medicine | BioChemical Engineering
Pinned Repositories
3D_Scaffold
3D-Scaffold Generator
AA_VAE
Amino-acid Variational Autoencoder
awesome-mlss
List of summer schools in machine learning + related fields across the globe
beta-lactamase
chem_tutorial
DATA_ANALYTICS
Discrete_Math_2
Discrete_Mathematics
Notes and Assignments for Discrete Mathematics I
ISGlobal_2023
Python Implementation of the R Codes in the Summer School
Linear_Algebra
Discrete III
gerard-ompad's Repositories
gerard-ompad/Discrete_Mathematics
Notes and Assignments for Discrete Mathematics I
gerard-ompad/DATA_ANALYTICS
gerard-ompad/Discrete_Math_2
gerard-ompad/Linear_Algebra
Discrete III
gerard-ompad/Natural_Language_Processing
gerard-ompad/awesome-mlss
List of summer schools in machine learning + related fields across the globe
gerard-ompad/bk_clustering
Burj Khalifa Clustering method
gerard-ompad/ChemBioMultimodalAutoencoders
a package for streamlined multidomain data integration and translation based on cross-modal autoencoders architectures
gerard-ompad/Chemoinformatics-tutos
Compilation of chemoinformatics and machine learning techniques
gerard-ompad/ice_breaker
gerard-ompad/dockstring
A Python package for molecular docking with an extensive, highly-curated dataset and a set of realistic benchmark tasks for drug discovery.
gerard-ompad/evodiff
Generation of protein sequences and evolutionary alignments via discrete diffusion models
gerard-ompad/Extreme_Value_Modeling_Webinar
gerard-ompad/FRoGS
Functional Embedding of Gene Signatures
gerard-ompad/functime
Time-series machine learning and embeddings at scale.
gerard-ompad/GraphPruning
Package for "pruning" weighted complex networks based on the Marginal Likelihood Filter.
gerard-ompad/Intelligent_Systems
Codes for Intelligent Systems
gerard-ompad/langchain
⚡ Building applications with LLMs through composability ⚡
gerard-ompad/LangChain_Projects
Personal Projects in LLM Applications using LangChain and Pinecone.
gerard-ompad/LLM-finetuning-scripts
gerard-ompad/mbt_gym
mbt_gym is a module which provides a suite of gym environments for training reinforcement learning (RL) agents to solve model-based high-frequency trading problems such as market-making and optimal execution. The module is set up in an extensible way to allow the combination of different aspects of different models. It supports highly efficient imp
gerard-ompad/Mentsea-Chatbot
Mentsea is a friendly mental health chatbot for Southeast Asian Countries.
gerard-ompad/metaflow
:rocket: Build and manage real-life data science projects with ease!
gerard-ompad/openturns
Uncertainty treatment library
gerard-ompad/pqsar2cpd
pqsar2cpd is a deep learning algorithm for translation of activity profiles into novel molecules.
gerard-ompad/PromptSMILES
Scaffold decoration and fragment linking with chemical language models and RL
gerard-ompad/RdkitTools
This GitHub repository contains tools and scripts for calculating molecular properties using RDKit, a powerful open-source library for computational chemistry. These tools can be used for in silico drug design, virtual screening, and other applications in medicinal chemistry.
gerard-ompad/teemi
teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, design libraries, and track samples. Open-source Python platform for workflow flexibility and automated tasks, accelerating metabolic engineering. Try teemi with our Google Colab notebooks!
gerard-ompad/TuoTuo
Implemented the Smoothed Varational Inference version of Latent Dirichlet Allocation, following David M. Blei et al. 2003
gerard-ompad/tweedie
Tweedie family density estimation in python