/oscar-scripts

Scripts used by BNC on Oscar

Primary LanguageShell

OSCAR Scripts

Scripts used by BNC on Oscar

xnat-token

Generates a new user token for XNAT

USAGE

xnat-token [OPTIONS]

OPTIONS

-d Connect to development XNAT

-h Displays this help message

-u Username for XNAT

EXAMPLES

xnat-token -u broarr

NOTES

XNAT tokens live for 48 hours before they're invalidated.

singularity-sync

Sbatch script to sync registered singularity images into Oscar

dicomsort

Script that calls the afni program dicom_hdr to read header information, reads the information and then renames and sorts the files alphabetically