ghorbanimahdi73
Computational biophysics, University of Maryland (UMD), National Institute of Health (NIH)
Pinned Repositories
3DLinker
An E(3) Equivariant Variational Autoencoder for Molecular Linker Design
Allostery-NRI
code for learning allosteric point-to-point communication in protein dynamics using an efficient Neural relational inference
AMPGen
Attention based variational auto encoder for antimicrobial peptide generation
autofragdiff
awesome-machine-learning
A curated list of awesome Machine Learning frameworks, libraries and software.
chemCPA
Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.
deeptime
Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation
DiffSBDD
A Euclidean diffusion model for structure-based drug design.
GMVAE-MD
GraphVampNet
ghorbanimahdi73's Repositories
ghorbanimahdi73/GraphVampNet
ghorbanimahdi73/GMVAE-MD
ghorbanimahdi73/autofragdiff
ghorbanimahdi73/3DLinker
An E(3) Equivariant Variational Autoencoder for Molecular Linker Design
ghorbanimahdi73/Allostery-NRI
code for learning allosteric point-to-point communication in protein dynamics using an efficient Neural relational inference
ghorbanimahdi73/AMPGen
Attention based variational auto encoder for antimicrobial peptide generation
ghorbanimahdi73/awesome-machine-learning
A curated list of awesome Machine Learning frameworks, libraries and software.
ghorbanimahdi73/chemCPA
Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.
ghorbanimahdi73/deeptime
Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation
ghorbanimahdi73/DiffSBDD
A Euclidean diffusion model for structure-based drug design.
ghorbanimahdi73/ghorbanimahdi73.github.io
My personal website
ghorbanimahdi73/linking
ghorbanimahdi73/siamese-triplet
Siamese and triplet networks with online pair/triplet mining in PyTorch