gianfilippo

I currently work at Yale University as Assistant Professor in Computational and Systems Biology. My background is in Engineering.

Yale UniversityNew Haven, CT (USA)

Pinned Repositories

ProjecTILs
Interpretation of cell states using reference single-cell maps
Language:R245 9 8828
drop
Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders
Language:Python130 14 35043
Coursera
Coursera related homework
0 1 00
datasciencecoursera
Coursera Data Science related homework
0 1 00
datasharing
The Leek group guide to data sharing
0 1 01
dorothea
R package to access DoRothEA's regulons
Language:R0 0 00
GCDcp
Getting and Cleaning Data course project
Language:R0 1 00
somaticseq
An ensemble approach to accurately detect somatic mutations using SomaticSeq
Language:Shell0 0 00
miloR
R package implementation of Milo for testing for differential abundance in KNN graphs
Language:R338 9 24422
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Language:Nextflow393 128 691403

gianfilippo's Repositories

gianfilippo/Coursera
Coursera related homework
0 1 00
gianfilippo/datasciencecoursera
Coursera Data Science related homework
0 1 00
gianfilippo/datasharing
The Leek group guide to data sharing
0 1 01
gianfilippo/dorothea
R package to access DoRothEA's regulons
Language:R0 0 00
gianfilippo/GCDcp
Getting and Cleaning Data course project
Language:R0 1 00
gianfilippo/somaticseq
An ensemble approach to accurately detect somatic mutations using SomaticSeq
Language:Shell0 0 00