gibsramen
Software Engineer @czbiohub-sf. Bioinformatics PhD interested in developing software & stats to tackle biological problems. NeoVim fanatic.
Chan-Zuckerberg BiohubSan Diego, CA
gibsramen's Stars
nektos/act
Run your GitHub Actions locally 🚀
nvim-telescope/telescope.nvim
Find, Filter, Preview, Pick. All lua, all the time.
NVIDIA/NeMo
A scalable generative AI framework built for researchers and developers working on Large Language Models, Multimodal, and Speech AI (Automatic Speech Recognition and Text-to-Speech)
fsnotify/fsnotify
Cross-platform filesystem notifications for Go.
nikitabobko/AeroSpace
AeroSpace is an i3-like tiling window manager for macOS
phiresky/ripgrep-all
rga: ripgrep, but also search in PDFs, E-Books, Office documents, zip, tar.gz, etc.
yetone/avante.nvim
Use your Neovim like using Cursor AI IDE!
gorakhargosh/watchdog
Python library and shell utilities to monitor filesystem events.
actions/runner
The Runner for GitHub Actions :rocket:
sqlalchemy/alembic
A database migrations tool for SQLAlchemy.
nextflow-io/nextflow
A DSL for data-driven computational pipelines
michaelb/sniprun
A neovim plugin to run lines/blocs of code (independently of the rest of the file), supporting multiples languages
atlassian-api/atlassian-python-api
Atlassian Python REST API wrapper
sharkdp/numbat
A statically typed programming language for scientific computations with first class support for physical dimensions and units
r-lib/lintr
Static Code Analysis for R
andrewrk/poop
Performance Optimizer Observation Platform
ramonhagenaars/nptyping
💡 Type hints for Numpy and Pandas
theislab/single-cell-transformer-papers
TencentAILabHealthcare/scBERT
vapourlang/vapour
Typed superset of R
JackieHanLab/TOSICA
Transformer for One-Stop Interpretable Cell-type Annotation
TechieGuy12/FileWatcher
A file and folder monitor that can send notifications, perform actions, or execute a command when a file or folder is changed.
r-lib/tree-sitter-r
NVIDIA/BioNeMo
BioNeMo NIMs example notebooks: for optimized inference at scale
SuperBianC/scMulan
Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.
LukeGoodsell/nextflow-vim
Nextflow plugin for VIM
jkobject/geneformer
cantinilab/scPRINT
single cell foundation model for Gene network inference and more
matthuska/tree-sitter-nextflow
Tree sitter parser for nextflow
vapourlang/vapour-nvim
Nvim plugin for vapour