Pinned Repositories
fetal_brain_seg
A toolkit for fetal brain localization and segmentation using deep learning
GIFT-Grab
An open-source C++ and Python API for acquiring, processing and encoding video streams in real time. Supports several frame-grabber cards, standard-compliant network streams and video files. Python API is compatible with NumPy and SciPy.
GiftCloudUploader
A Java Web Start application for anonymising and uploading DICOM data to a GIFT-Cloud or XNAT server
HighRes3DNet
MONAIfbs
NiftyMIC
NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.
NSoL
The Numerical Solver Library (NSoL) is a research-focused toolkit for denoising and deconvolution applications using ADMM and Primal-Dual methods.
puma
Python Unified Multi-tasking API (PUMA)
SimpleReg
SimpleReg is a research-focused toolkit that provides tools helpful for (medical) image registration and processing.
SlicSeg
An API and GUI application for semi-automated interactive segmentation of medical images.
GIFT-Surg's Repositories
gift-surg/NiftyMIC
NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.
gift-surg/GIFT-Grab
An open-source C++ and Python API for acquiring, processing and encoding video streams in real time. Supports several frame-grabber cards, standard-compliant network streams and video files. Python API is compatible with NumPy and SciPy.
gift-surg/HighRes3DNet
gift-surg/MONAIfbs
gift-surg/SimpleReg
SimpleReg is a research-focused toolkit that provides tools helpful for (medical) image registration and processing.
gift-surg/SlicSeg
An API and GUI application for semi-automated interactive segmentation of medical images.
gift-surg/fetal_brain_seg
A toolkit for fetal brain localization and segmentation using deep learning
gift-surg/NSoL
The Numerical Solver Library (NSoL) is a research-focused toolkit for denoising and deconvolution applications using ADMM and Primal-Dual methods.
gift-surg/PySiTK
PySiTK is a research-focused toolkit containing a collection of Python helper functions. In particular it facilitates the interaction between SimpleITK and ITK.
gift-surg/DyBaORF
Dymanically Balanced Online Random Forest
gift-surg/FetalBrainParcellation
A tool for the automatic segmentation of fetal brain 3D T2-weighted MRI
gift-surg/GiftCloudServerBuilder
GIFT-Cloud's customised fork of xnatbuilder, used to set up a GIFT-Cloud server
gift-surg/GiftCloudUploader
A Java Web Start application for anonymising and uploading DICOM data to a GIFT-Cloud or XNAT server
gift-surg/VolumetricReconstructionFromPrintedFilms
A research-focused toolkit developed within the GIFT-Surg project to reconstruct a volumetric representation from printed brain MR films.
gift-surg/ITK_NiftyMIC
This repository contains numerous additional filters and functions to extend the standard (Wrap)ITK Release 4.13. It is a necessary requirement in order to use NiftyMIC and related toolkits.
gift-surg/NiftyMatch
A library featuring GPU implementations of feature detection and matching algorithms.
gift-surg/Xono2L
LabVIEW-compatible, extensible C++ API for capturing live ultrasound streams
gift-surg/SPOT-A-NeonatalRabbit
Segmentation Propagation on Target (...as a Neonatal Rabbit)
gift-surg/FetalBrainSegmentation_MONAI
Tool for fetal brain segmentation in MRI
gift-surg/lie_exponential
Numerical computation of the Lie exponential for stationary velocity fields.
gift-surg/MRImultiAtlasForNeonatalRabbitBrain
Code for the benchmarking and validation of the Neonatal Rabbit brain Multi-Atlas
gift-surg/vessel-tools
Scripts and utility programs for extracting and processing vasculature
gift-surg/puma
Python Unified Multi-tasking API (PUMA)
gift-surg/endocal
A cross-platform, compact GUI application for the optical distortion calibration of fluid-immersed endoscopes
gift-surg/GiftCloudServerModule
GIFT-Cloud's customised server module, used to customise a GIFT-Cloud server
gift-surg/RabbitBrainAnalysis
Full pipeline for processing, segmentation and data analysis of a rabbit brain scan. See also https://www.sciencedirect.com/science/article/pii/S1053811918305366?via%3Dihub