gih0004

Lab-5

The step-by-step instructions for Lab Assignment 5 can be found here

gih0004

Identifying_Orthologues

This repository is intented to provide an overview of integrating Orthofinder and Blastn for identifying orthologues between references genomes

Research_helpers

This repository is to store different scripts that can be implemented for automating different experimental setups

RNA_salmon_to_visualization

Contains scripts used to generate Heatmaps for TPM expression for transcritps/loci of interest from filtered paired-end RNA reads

RNA_Seq_featurecounts

This repository contatins a pipeline for RNA-Seq data processing using featurecounts for gene count generation

RNA_seq_pipeline

RNA seq pipeline designed for paired end reads using HTSEQ for producing files needed for visualizing transcriptomic data with DESEQ2

gih0004/RNA_salmon_to_visualization

Contains scripts used to generate Heatmaps for TPM expression for transcritps/loci of interest from filtered paired-end RNA reads

gih0004/RNA_Seq_featurecounts

This repository contatins a pipeline for RNA-Seq data processing using featurecounts for gene count generation

gih0004/RNA_seq_pipeline

RNA seq pipeline designed for paired end reads using HTSEQ for producing files needed for visualizing transcriptomic data with DESEQ2

gih0004/gih0004

gih0004/Identifying_Orthologues

This repository is intented to provide an overview of integrating Orthofinder and Blastn for identifying orthologues between references genomes

gih0004/Research_helpers

This repository is to store different scripts that can be implemented for automating different experimental setups