gimme00/awesome-pharmacometrics

a currated list of pharmacometrics material

Awesome pharmacometrics

A curated list of pharmacometrics material

• Universities / consortia offering pharmacometrics curriculae

• Journals

• Essential journal articles

• Conferences

• Software

• Tutorials

• Blogs

• Books

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Resources

## Universities Universities offering post-graduate training in pharmacometrics (listed alphabetically)

• Europe
  • Copenhagen, Denmark
    • Germany
    • Uppsala, Sweden
    • Utrecht, the Netherlands
    • Padova, Italy
    • Pamplona, Spain
    • ...
• North America
  • UMD, Baltimore, MD
    • SUNY, Buffalo, NY
    • UF, Orlando, FL
    • UCSF, San Francisco, MD
    • ...
• Australia
  • Brisbane
  • Melbourne
    • Sydney
    • ...
• New Zealand
  • Otago
• Africa
  • Cape Town
    • ...
• Asia
  • ...
• South America
  • ...

## Journals Journals with focus on pharmacometrics or related topics

pharmacometrics

• Journal of Pharmacokinetics & Pharmacodynamics (JPKPD)
• Clinical Pharmacology & Therapeutics: Pharmacometrics & Systems Pharmacology (CPT-PSP)

clinical

drugdev

statistics

## Essential journal articles Essential reading in pharmacomtrics

## Conferences Conferences with a focus on pharmacometrics or related themes

Primary focus on pharmacometrics

• WCOP
• ACOP
• PAGE
• PAGANZ
• PAGIN

Partial focus on pharmacometrics

• ASCPT
• IATDMCT

## Software

General

General purpose software

• R
• RStudio
• Python

Model estimation

Software for model estimation (& simulation)

• NONMEM
• Monolix
• Saemix
• Phoenix NLME
• Stan
• WinBUGS

Tools

Miscellaneous other tools

• Perl-speaks-NONMEM (PsN)
• metrumrg

Graphical User Interfaces

User interfaces for model estimation software or other tools

• Pirana
• Phoenix
• Mango Navigator
• PLTools
• PDxPop
• Kiwi

Plotting and related

• ggplot2
• Xpose

Tutorials

Tutorial in PK-PD modeling & simulation related topics

• Basic Concepts in Population Modeling, Simulation, and Model-Based Drug Development (Mould & Upton)
• Basic Concepts in Population Modeling, Simulation, and Model-Based Drug Development - Part 2: Introduction to Pharmacokinetic Modeling Methods (Mould & Upton)
• Physiologically Based Pharmacokinetic Modeling and Simulation in Pediatric Drug Development (Maharaj & Edginton)
• Modeling and Simulation of Count Data (Plan)
• Visualization and Communication of Pharmacometric Models With Berkeley Madonna (Krause & Lowe)
• Application of ggplot2 to Pharmacometric Graphics (Ito & Murphy)
• Modeling and Simulation Workbench for NONMEM: Tutorial on Pirana, PsN, and Xpose (Keizer, Hooker, Karlsson)
• A Time to Event Tutorial for Pharmacometricians (Holford)

## Blogs

Personal blogs

Commercial blogs

Other blogs

## Books

Pharmacometrics

Books with a focus on pharmacometrics

• Bonate, Peter L. Pharmacokinetic-Pharmacodynamic Modeling and Simulation
• Lavielle, Marc Mixed Effects Models for the Population Approach: Models, Tasks, Methods and Tools

Clinical Pharmacology

Math

Stats

• Pawitan, Yudi In all likelihood

Software-engineering

Essential books about software engineering

• Hunt & Thomas The Pragmatic Programmer
• McConnell, Steve. Code Complete: A Practical Handbook of Software Construction

Miscellaneous

Books about miscellaneous topics

• Bonate Peter L. Be a Model Communicator: and Sell Your Models to Anyone. A book on how to comminuicate modeling results