/EpiMethEx-Filter

Primary LanguageRApache License 2.0Apache-2.0

EpiMethEx-Filter

The script implements six types of filters, each one having different conditions combined through Boolean operators.

  1. Filtering of data according to the median values among methylation stratification levels

  2. Filtering of data according to β-difference

  3. Filtering of data according to the methylation stratification levels p value

  4. Filtering of data according to FC

  5. Student t-test p value filtering

  6. Filtering of data according to Pearson correlation p value

HOW TO USE

  1. Set nameFolderDest variable with the path where you would save the filtered table
  2. Change, eventually, the default value of the variables Pvalue, FoldChange, etc..
  3. Run the Script