gjoni

protein structure prediction, computational biology

Institute for Protein Design, UWSeattle, WA

Pinned Repositories

gremlin-ipot
Experimental GREMLIN version with RRCE statistical potentials
Language:C++2 5 10
iPot
A set of programs to calculate inter- and intra-protein contact energies
Language:C++6 1 01
ipot_solver
A program to solve the Inverse Potts problem
Language:C2 0 00
map_align
Contact map alignment
Language:C++15 2 05
mylddt
mylddt
Language:C++6 1 52
phipsi
Language:Jupyter Notebook1 0 01
trDesign
trRosetta for protein design
Language:Jupyter Notebook173 12 834
trRosetta
A package to predict protein inter-residue geometries from sequence data
Language:Python206 11 1345
trRosetta2_training_set
2 1 04
trRosetta2
Repository for publicly available deep learning models developed in Rosetta community
Language:Python107 9 1520

gjoni's Repositories

gjoni/trRosetta
A package to predict protein inter-residue geometries from sequence data
Language:Python206 11 1345
gjoni/trDesign
trRosetta for protein design
Language:Jupyter Notebook173 12 834
gjoni/map_align
Contact map alignment
Language:C++15 2 05
gjoni/iPot
A set of programs to calculate inter- and intra-protein contact energies
Language:C++6 1 01
gjoni/mylddt
mylddt
Language:C++6 1 52
gjoni/gremlin-ipot
Experimental GREMLIN version with RRCE statistical potentials
Language:C++2 5 10
gjoni/ipot_solver
A program to solve the Inverse Potts problem
Language:C2 0 00
gjoni/trRosetta2_training_set
2 1 04
gjoni/phipsi
Language:Jupyter Notebook1 0 01
gjoni/ColabFold
Making Protein folding accessible to all via Google Colab!
Language:Jupyter Notebook0 0 00
gjoni/OPERA
Free and open-source application (command line and GUI) providing QSAR models predictions as well as applicability domain and accuracy assessment for physicochemical properties, environmental fate and toxicological endpoints. ==================>Download the latest compiled version from the "releases" tab and run the executable installer.
Language:MATLAB0 0