The download URL may be disabled
bioinformaticspcj opened this issue · 8 comments
bioinformaticspcj commented
Hi, I just try to download the phylosift, but I can not reach the URL :"http://edhar.genomecenter.ucdavis.edu/~koadman/phylosift/phylosift_latest.tar.bz2"
was it disabled?
gjospin commented
Yes it was. Please use the following link to manually install the database.
https://figshare.com/articles/PhyloSift_markers_database/5755404/4
…Sent from my iPhone
On Apr 8, 2018, at 7:57 PM, bioinformaticspcj ***@***.***> wrote:
Hi, I just try to download the phylosift, but I can not reach the URL :"http://edhar.genomecenter.ucdavis.edu/~koadman/phylosift/phylosift_latest.tar.bz2"
was it disabled?
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manli-zou commented
There is a problem with this link, it is more like a web page instead of a database
https://figshare.com/articles/PhyloSift_markers_database/5755404/4
gjospin commented
Yes and from there, there are download links that will let you download the
data files.
…On Mon, Aug 13, 2018 at 8:20 PM, manli-zou ***@***.***> wrote:
There is a problem with this link, it is more like a web page instead of a
database
https://figshare.com/articles/PhyloSift_markers_database/5755404/4
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manli-zou commented
Thanks.
but no matter which link I clicked in , another web page showed out.
Could you nicely help me check it
gjospin commented
Strange.
Let me see if I can describe what I do.
So at the top of the page, I see 4 boxes, each representing 1 tarball or
file to download. If you mouseover the boxes the word "view" and an arrow
will appear at the bottom of the box.
Can you try click on the arrow and see if that downloads the file for you?
You will need ncbi.tgz and markers.tgz
…On Mon, Aug 13, 2018 at 9:36 PM, manli-zou ***@***.***> wrote:
Thanks.
but no matter which link I clicked in , another web page showed out.
Could you nicely help me check it
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manli-zou commented
The problem is solved.
Thank you so much ~
Things went all well when I turned to use Microsoft edge instead of Google Chrome.
Maybe this is the reason.
osvatic commented
The link provided is now broken. Can you please provide a new link for the downloading of phylosift dbs?
gjospin commented
Which link are you referring to?
The following seems to be working fine this morning. This URL will not work
within the automatic download code. You will need to manually untar and
place the DB in the right directory.
https://figshare.com/articles/PhyloSift_markers_database/5755404/4
…On Fri, Jul 5, 2019 at 2:44 AM osvatic ***@***.***> wrote:
The link provided is now broken. Can you please provide a new link for the
downloading of phylosift dbs?
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