Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
datascience-box
Data Science Course in a Box
generate-stickers-AveryL7871
This script reads sample names from a txt file (one name per line) and arranges them on a sheet of A4 paper so that they can be printed on Avery-Zweckform L7871 labels. This version of the script is written in Python and is conceptually based on v1, which was written in bash.
ggplate
Create Layout Plots of Biological Culture Plates and Microplates
gl-eb.github.io
Gleb Ebert's personal website
glebs-article-template
This is an article template for quarto
growthcurver
Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whose parameters (the growth rate, the initial population size, and the carrying capacity) provide meaningful population-level information with straight-forward biological interpretation.
minimal-doc
This template is for a PDF output using Typst through Quarto
tecanr
tecanr is an R package to extract data from Excel files generated by Tecan Infinite 200 Pro plate readers
yardlistr
An R package for analysis of your yardlist data from eBird
gl-eb's Repositories
gl-eb/growthcurver
Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whose parameters (the growth rate, the initial population size, and the carrying capacity) provide meaningful population-level information with straight-forward biological interpretation.
gl-eb/minimal-doc
This template is for a PDF output using Typst through Quarto
gl-eb/tecanr
tecanr is an R package to extract data from Excel files generated by Tecan Infinite 200 Pro plate readers
gl-eb/bioconda-recipes
Conda recipes for the bioconda channel.
gl-eb/datascience-box
Data Science Course in a Box
gl-eb/generate-stickers-AveryL7871
This script reads sample names from a txt file (one name per line) and arranges them on a sheet of A4 paper so that they can be printed on Avery-Zweckform L7871 labels. This version of the script is written in Python and is conceptually based on v1, which was written in bash.
gl-eb/ggplate
Create Layout Plots of Biological Culture Plates and Microplates
gl-eb/gl-eb.github.io
Gleb Ebert's personal website
gl-eb/glebs-article-template
This is an article template for quarto
gl-eb/glebs-pandoc-config
This repository contains the default configuration I use to convert files to pdf using pandoc
gl-eb/homebrew-bio
:beer::microscope: Bioinformatics formulae for the Homebrew package manager (macOS and Linux)
gl-eb/pyblastr
This fork of the Pyblastr repository gets rid of everything that is needed to build the website and focuses on extracting the underlying data aswell as creating a couple of simple summary statistic and a map plot.
gl-eb/tecan
Read Absorbance Files of the Tecan Plate Reader Infinite 200
gl-eb/yardlistr
An R package for analysis of your yardlist data from eBird
gl-eb/htseq
HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
gl-eb/mbarq_app
gl-eb/protocols-phtac
This is a collection of personal protocols for working with Pseudoalteromonas haloplanktis
gl-eb/quarto-web
Quarto website
gl-eb/readxl
Read excel files (.xls and .xlsx) into R 🖇
gl-eb/stashr
A dynamic move command or simple file stash
gl-eb/sverto
Add Svelte components to your Quarto documents