glickmac/VF_HMM

VF_HMM

Detail How the PFAMs are Collected

Detail how models are built

Include addition of '\' for hmmpress

Gather refseq data

ftp://ftp.ncbi.nlm.nih.gov/refseq/release/viral/

Generate

hmmsearch PFAM_pVOG_Virulence.hmm viral.1.protein.faa > viral_ncbi.out

Parse Output

Generate Statistics by family of Virus