Global.health

Global.health is an initiative to deliver a cutting-edge, secure data and analytics platform to support pandemic and epidemic response

Pinned Repositories

covid19-omicron
Curated datasets on reported cases of the SARS-CoV-2 Omicron (B.1.1.529) Variant of Concern
Language:Shell10 6 00
ebola
Ebola Uganda 2022 repository
Language:Python5 1 131
fhirflat
ISARIC 3.0 Pipeline - FHIRFlat
Language:Python0 2 280
InsightBoard
A dashboard to upload and manage data and generate reports.
Language:Python31
isaric
ISARIC Clinical Data Model development
Language:Python4 5 730
list
Repository for Global.health: a data science initiative to enable rapid sharing of trusted and open public health data to advance the response to infectious diseases.
Language:TypeScript39 3 1.2k7
marburg
Marburg 2023 outbreak repository
Language:Python0 2 40
monkeypox
Mpox 2022 repository
Language:HTML175 13 17637
outbreak-schema
Global.health Day Zero Outbreak schema
2 2 330
turnkey-curator-portal
Language:TypeScript0 1 950

Global.health's Repositories

globaldothealth/monkeypox
Mpox 2022 repository
Language:HTML175 13 17637
globaldothealth/list
Repository for Global.health: a data science initiative to enable rapid sharing of trusted and open public health data to advance the response to infectious diseases.
Language:TypeScript39 3 1.2k7
globaldothealth/covid19-omicron
Curated datasets on reported cases of the SARS-CoV-2 Omicron (B.1.1.529) Variant of Concern
Language:Shell10 6 00
globaldothealth/ebola
Ebola Uganda 2022 repository
Language:Python5 1 131
globaldothealth/isaric
ISARIC Clinical Data Model development
Language:Python4 5 730
globaldothealth/covid-19
Data for the "covid-19" disease.
Language:Python3 2 02
globaldothealth/InsightBoard
A dashboard to upload and manage data and generate reports.
Language:Python31
globaldothealth/monkeypox-viz
Monkeypox map visualization 2022
Language:TypeScript2 1 50
globaldothealth/outbreak-schema
Global.health Day Zero Outbreak schema
2 2 330
globaldothealth/adtl
Another data transformation language
Language:Python1 4 270
globaldothealth/common
Common geographical data
Language:Python1 2 00
globaldothealth/covid19-variants-summary
This code summarises data from GISAID by epiweek. Outputs and analyses using these data are published in Gonçalves et al. eLife 2022;11:e80556. DOI: https://doi.org/10.7554/eLife.80556
Language:Jupyter Notebook1 3 61
globaldothealth/who-report-extractor
Extracts information from WHO briefing report PDFs
Language:Python1 3 00
globaldothealth/fhirflat
ISARIC 3.0 Pipeline - FHIRFlat
Language:Python0 2 280
globaldothealth/marburg
Marburg 2023 outbreak repository
Language:Python0 2 40
globaldothealth/monkeypox-report
Monkeypox summary report
Language:HTML0 2 90
globaldothealth/olm
Office for Linelist Management
Language:Python0 2 40
globaldothealth/outbreak-data
For users of G.h data: notes, timelines, sources, etc.
00
globaldothealth/turnkey-curator-portal
Language:TypeScript0 1 950
globaldothealth/viz
Web frontend to visualize disease data
Language:JavaScript0 2 03
globaldothealth/.github
2 0
globaldothealth/arcmapper
Automapper library for ISARIC ARC
Language:Python
globaldothealth/autoparser
Language:Python
globaldothealth/ebola-viz
Map and chart visualizations of Ebola disease
Language:TypeScript1 0
globaldothealth/Ebola_SitReps_Uganda_2022
Digitizing Ebola SitReps from Uganda
Language:R0 0
globaldothealth/InsightBoard-SampleProject
Sample project for InsightBoard
Language:Python
globaldothealth/polyflame
Polymorphic Flexible Analytics and Modelling Engine
Language:Python2 2
globaldothealth/react
Language:TypeScript1 0
globaldothealth/viz-react
React visualizations for Map
Language:TypeScript1 0
globaldothealth/woah_wahis_flu_a
Repository for code and data associated with influenza A reports in animals to the World Organization for Animal Health
Language:Python