Pinned Repositories
ads1-notebooks
Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing
ads1-slides
Slides for Algorithms for DNA Sequencing Coursera class
BGI-data-analysis
assemblies, annotations, further analysis on sequenced strains from the EHEC outbreak
comp-genomics-class
Code and examples for JHU Computational Genomics class
dockstore-tool-bamstats
A repo for the BAMStats command, used as the tutorial for Dockstore
genbank_submit
Scripts and instructions for submitting annotated microbial genomes to Genbank
kraken
Kraken taxonomic sequence classification system
lncRNA-Annotation-nf
A Nextflow lncRNA Annotation Pipeline based on STAR, Cufflinks and FEELnc
machine-learning-cheat-sheet
Classical equations and diagrams in machine learning
ojs
Open Journal Systems
gnaneshan's Repositories
gnaneshan/ads1-notebooks
Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing
gnaneshan/ads1-slides
Slides for Algorithms for DNA Sequencing Coursera class
gnaneshan/BGI-data-analysis
assemblies, annotations, further analysis on sequenced strains from the EHEC outbreak
gnaneshan/comp-genomics-class
Code and examples for JHU Computational Genomics class
gnaneshan/dockstore-tool-bamstats
A repo for the BAMStats command, used as the tutorial for Dockstore
gnaneshan/genbank_submit
Scripts and instructions for submitting annotated microbial genomes to Genbank
gnaneshan/kraken
Kraken taxonomic sequence classification system
gnaneshan/lncRNA-Annotation-nf
A Nextflow lncRNA Annotation Pipeline based on STAR, Cufflinks and FEELnc
gnaneshan/machine-learning-cheat-sheet
Classical equations and diagrams in machine learning
gnaneshan/ojs
Open Journal Systems
gnaneshan/rnaseq
RNA sequencing analysis pipeline using STAR, HISAT2 and Salmon with gene counts and quality control
gnaneshan/rnaseq-nf
A proof of concept of RNAseq pipeline
gnaneshan/RNAseq-nf-1
RNAseq analysis pipeline
gnaneshan/rnatoy
A proof of concept RNA-Seq pipeline with Nextflow