Pinned Repositories
AnalysisForDSPopulationCodes
Analysis methods for populations of direction-selective ganglion cells. Accompanying a manuscript by Kühn and Gollisch.
ConvertDatMEA
Extract channels from multielectrode array (MEA) recordings. Can convert from MSRD or MCD files to a binary format.
ExtractEyeFixationsForNaturalStimuli
Extract and format fixations from eye tracking data
phy-MEA
Phy (older version) stable for MEA recordings at the cost of lacking the latest features
phy_plugins
Plugins for the manual spike sorting program phy
pymer
Collection of Python scripts for analyzing extracellular multielectrode array recordings from the retina in the Gollisch lab, Göttingen.
RecreateWhiteNoiseStimuliWithMatlab
Matlab code to recreate random number lists for white noise stimuli in the lab
STNMF_with_AFHALS
A fast and versatile implementation of spike-triggered non-negative matrix factorization (STNMF) based on accelerated/fast HALS algorithms
STNMFanalysis
Code for neuronal subunit analysis with spike-triggered non-negative matrix factorization
Subunits_with_Superresolution_Tomography
Simulations of subunit model of a retinal ganglion cell in response to Mexican-hat-like bar stimuli and reconstruction of subunit layout via inverse Radon transform.
Gollisch Lab's Repositories
gollischlab/STNMFanalysis
Code for neuronal subunit analysis with spike-triggered non-negative matrix factorization
gollischlab/STNMF_with_AFHALS
A fast and versatile implementation of spike-triggered non-negative matrix factorization (STNMF) based on accelerated/fast HALS algorithms
gollischlab/AnalysisForDSPopulationCodes
Analysis methods for populations of direction-selective ganglion cells. Accompanying a manuscript by Kühn and Gollisch.
gollischlab/ConvertDatMEA
Extract channels from multielectrode array (MEA) recordings. Can convert from MSRD or MCD files to a binary format.
gollischlab/ExtractEyeFixationsForNaturalStimuli
Extract and format fixations from eye tracking data
gollischlab/GGNB-python-course
GGNB Short Method Course "Spike-train analysis with Python" in the Gollisch Lab
gollischlab/IRScellSimulation
Simulation of a specific type of retinal ganglion cell under saccade-like image transitions. Accompanying a manuscript by Krishnamoorthy, Weick, and Gollisch.
gollischlab/phy-MEA
Phy (older version) stable for MEA recordings at the cost of lacking the latest features
gollischlab/phy_plugins
Plugins for the manual spike sorting program phy
gollischlab/pymer
Collection of Python scripts for analyzing extracellular multielectrode array recordings from the retina in the Gollisch lab, Göttingen.
gollischlab/RecreateWhiteNoiseStimuliWithMatlab
Matlab code to recreate random number lists for white noise stimuli in the lab
gollischlab/RecreateWhiteNoiseStimuliWithPython
Code for regenerating the random-number-based contrast values used for white-noise stimulation in the Gollisch Lab. Used for both temporal and spatiotemporal stimuli.
gollischlab/Subunits_with_Superresolution_Tomography
Simulations of subunit model of a retinal ganglion cell in response to Mexican-hat-like bar stimuli and reconstruction of subunit layout via inverse Radon transform.
gollischlab/ChromaticIntegrationAnalysis
Code for analyzing chromatic integration properties of recorded retinal ganglion cells in the data accompanying the paper by Khani and Gollisch, 2021.
gollischlab/Super-Resolved_Tomographic_Reconstruction
Simulations of subunit models of retinal ganglion cells and reconstruction of their subunits with super-resolved tomographic reconstruction (STR).