THIS PACKAGE IS UNDER ACTIVE DEVELOPMENT. IT IS NOT PART OF HADES.
PubmedQuery is an R package designed to understand medication compliance and persistence in cohort studies.
- Calculate key adherence metrics such as medication possession ratio and proportional days covered, with and without stockpiling.
- Assess drug utilization from first exposure through user-defined persistence windows.
- Visualize adherence patterns and statistics through both tabular and graphical outputss.
PubmedQuery is an R package.
Requires R (version 3.6.0 or higher).
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See the instructions here for configuring your R environment, including RTools and Java.
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In R, use the following commands to download and install PubmedQuery:
install.packages("remotes")
remotes::install_github("ohdsi/PubmedQuery")Documentation can be found on the package website.
PDF versions of the documentation are also available:
- Package manual: PubmedQuery.pdf
- Developer questions/comments/feedback: OHDSI Forum
- We use the GitHub issue tracker for all bugs/issues/enhancements
Read here how you can contribute to this package.
PubmedQuery is licensed under Apache License 2.0
PubmedQuery is being developed in R Studio.
PubmedQuery is under development.