greenjune-ship-it
Software engineer with biological background
University of KonstanzKonstanz, Germany
Pinned Repositories
AdvancedJavaProgramming
Lecture notes and exercises from course
biodiversity-explorer
Shiny app that visualizes observed species on the map
coral-future
CBASS Experiments Database
coralFutures
Django Application Template
SymPortal
SymPortal is an analytical tool used to identify Symbiodiniaceae genotypes using Illumina rDNA ITS2 amplicon NGS data.
SymPortalMetaAnalysis
untemplated-nucleotides-search
Snakemake pipeline for detection of untemplated nucleotides from RNA-seq data
CBASSED50
The CBASSED50 R package to process CBASS data
symportal-ansible
Ansible collection for SymPortal
symportal.org
SymPortal 2.0 Analytical Framework with refactored architecture
greenjune-ship-it's Repositories
greenjune-ship-it/coral-future
CBASS Experiments Database
greenjune-ship-it/coralFutures
Django Application Template
greenjune-ship-it/SymPortal
SymPortal is an analytical tool used to identify Symbiodiniaceae genotypes using Illumina rDNA ITS2 amplicon NGS data.
greenjune-ship-it/SymPortalMetaAnalysis
greenjune-ship-it/AdvancedJavaProgramming
Lecture notes and exercises from course
greenjune-ship-it/ansible
This repository contains my exercises with Ansible
greenjune-ship-it/biodiversity-explorer
Shiny app that visualizes observed species on the map
greenjune-ship-it/CodeClinicJava
Code Clinic solutions in Java
greenjune-ship-it/greenjune-ship-it
Config files for my GitHub profile.
greenjune-ship-it/guides-finder
Tool for searching guides sequences in FASTQ file
greenjune-ship-it/HairdresserBookingSystem
Example of Java Project with modular structure
greenjune-ship-it/JavaCodeChallenges
Solution of Code Challenges in Java
greenjune-ship-it/JavaEssentialTraining2019
Exercise files for LinkedIn Learning's course Java Essential Training
greenjune-ship-it/learning-python-dash
Learning notes for Python Dash
greenjune-ship-it/python-design-patterns
Basics Patterns implemented in Python
greenjune-ship-it/untemplated-nucleotides-search
Snakemake pipeline for detection of untemplated nucleotides from RNA-seq data
greenjune-ship-it/flask_gunicorn_nginx_docker
Template for deploying ML models using Flask + Gunicorn + Nginx inside Docker
greenjune-ship-it/grafana-prometheus
System monitoring for symportal.org
greenjune-ship-it/rspm-checker-dash-prototype
Experimental Dash application written in Python
greenjune-ship-it/scnprep_scanpy
scRNA-seq scanpy analysis & conversion to SCN format
greenjune-ship-it/senior
Python Questions for Senior and Lead roles
greenjune-ship-it/symportal.org
All code related to running symportal.org