greenstick
Biomedical computer scientist working applications of quantum machine learning and AI data watermarking.
@biodev Portland, OR
Pinned Repositories
bootstrapping-package-management-on-exacloud
A Procedure to Setup Package Management (Linuxbrew & Miniconda) & Update Compilers on OHSU's Exacloud
gatk-pipeliner
A pipeline evaluation system for my bioinformatics thesis; see link below for analysis scripts.
incentive-logger
A now legacy automated bike incentive logger for OHSU's bike incentive program.
interactor
Front-End Code for Tracking Interactions and Conversions on Websites.
ohsu-dissertation-template
A template for writing your dissertation in LaTeX, designed to the specifications outlined by the OHSU School of Medicine.
perceptron-notebook
Jupyter Notebook implementing a perceptron class in Python 3.
usda-hungry-pests-game
A Game to Educate Middle Schoolers on Hungry Pests!
greenstick's Repositories
greenstick/bioinformatics_programming
A course covering Python fundamentals and tools for bioinformatics and scientific computing
greenstick/bionode
Modular and universal bioinformatics
greenstick/bloocoo
Bloocoo is a k-mer spectrum-based read error corrector, designed to correct large datasets with a very low memory footprint.
greenstick/bv-conversion-benchmarking
Built at Column Five
greenstick/calendi-events
Calendar Visualization Application
greenstick/cris-gates-foundation
An interactive to guide educators through the College Readiness Indicator Systems (CRIS) Framework
greenstick/d3-canvas-network
A JavaScript prototype to render network data to canvas.
greenstick/debt-consolidation-calculator
Built at Column Five
greenstick/donors-choose-annual-report
Built at Column Five
greenstick/ftse-chinese-equities-interactive
An interactive infographic that illustrates predicted scenarios for the liberalization of the Chinese equities market.
greenstick/homebrew-science
:microscope: Scientific formulae for the Homebrew package manager
greenstick/KGEM
KGEM: Scala implementation of Reconstruction of viral population algorithm for single-amplicon sequencing data
greenstick/merchant-warehouse-interactive
Built at Column Five
greenstick/my-status-is-not-a-secret
A website built to raise funds for the AIDS/LifeCycle and encourage awareness of HIV/AIDS
greenstick/myapnea-amia-design-challenge
MyApnea OHSU team submission to AMIA Student Design Challenge
greenstick/neo4j-tutorial
Neo4j Tutorial for BioDSP
greenstick/ngsutils
Tools for next-generation sequencing analysis
greenstick/NSB
Course Repository
greenstick/panasonic-aviation-solution-builder
Built at Column Five
greenstick/pycuda
CUDA integration for Python, plus shiny features
greenstick/rover-site-dev
A Website for The Rover Film
greenstick/site-2014
Portfolio site 2014
greenstick/sports-interaction-sochi-2014-calendar
Built at Column Five
greenstick/squibble
Squibble
greenstick/stat-methods-kaggle-competition
Code base for model submissions to Kaggle competition hosted for Statistical Methods in Computational Biology class
greenstick/turbotax-health-subsidy-calculator
Built for Column Five
greenstick/wdl
Workflow Description Language - Specification and Implementations