Pinned Repositories
3D-ESPNet
Efficient Segmentation for Volumetric Data
3D-Machine-Learning
A resource repository for 3D machine learning
abdominal-multi-organ-segmentation
abdominal multi-organ segmentation using pytorch
ai-biopsy
AI-Deep-Learning-Lab
Data, notebooks, and articles associated with the RSNA AI Deep Learning Lab
AI-for-Healthcare-Nanodegree
Learn to build, evaluate, and integrate predictive models that have the power to transform patient outcomes. Begin by classifying and segmenting 2D and 3D medical images to augment diagnosis and then move on to modeling patient outcomes with electronic health records to optimize clinical trial testing decisions. Finally, build an algorithm that uses data collected from wearable devices to estimate the wearer’s pulse rate in the presence of motion.
Altas-of-Pelvis-Segmentation-and-Trajectory-Planning
An open-source pelvis atlas is constructed to provide pelvis CT segmentations, statistical shape models, and surgical screw trajectories
AnatomyNet-for-anatomical-segmentation
AnatomyNet: Deep 3D Squeeze-and-excitation U-Nets for fast and fully automated whole-volume anatomical segmentation
MIScnn
A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
MTL-SegTHOR
Dependent Multi-Task Learning for the Segmentation of Thoracic Organs at Risk in CT Images
gregoryperkins's Repositories
gregoryperkins/App_Bank_GUI_v01_PySide_Or_PyQt_Qt_Quick_QML
gregoryperkins/ARM-Net
A ready-to-use framework of the state-of-the-art models for structured (tabular) data learning with PyTorch. Applications include recommendation, CRT prediction, healthcare analytics, anomaly detection, and etc.
gregoryperkins/batchgenerators
A framework for data augmentation for 2D and 3D image classification and segmentation
gregoryperkins/dcmannotate
gregoryperkins/dwv-react
Medical image viewer using DWV (DICOM Web Viewer) and React.
gregoryperkins/fastapi
FastAPI framework, high performance, easy to learn, fast to code, ready for production
gregoryperkins/FlatLaf
FlatLaf - Swing Look and Feel (with Darcula/IntelliJ themes support)
gregoryperkins/full-stack-fastapi-postgresql
Full stack, modern web application generator. Using FastAPI, PostgreSQL as database, Docker, automatic HTTPS and more.
gregoryperkins/GUI_Programming_Python
Python GUI Programming with Electron JS and NODE JS.
gregoryperkins/Lifelong-nnUNet
gregoryperkins/luigi
Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.
gregoryperkins/med-imagetools
Transparent and reproducible medical image processing pipelines in Python.
gregoryperkins/med3web
Med3Web is a high performance web tool for advanced 2-D and 3-D medical visualizations.
gregoryperkins/medicaldetectiontoolkit
The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.
gregoryperkins/megawidget
Megawidgets for desktop app
gregoryperkins/mercure
mercure DICOM Orchestrator
gregoryperkins/nnDetection
nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without manual intervention. It includes guides for 12 data sets that were used to develop and evaluate the performance of the proposed method.
gregoryperkins/paperai
📄 🤖 AI-powered literature discovery and review engine for medical/scientific papers
gregoryperkins/pylidc
An object relational mapping for the LIDC dataset using sqlalchemy.
gregoryperkins/PyMeshLab
The open source mesh processing python library
gregoryperkins/PyOneDark_Qt_Widgets_Modern_GUI
gregoryperkins/pysurvival
Open source package for Survival Analysis modeling
gregoryperkins/scikit-survival
Survival analysis built on top of scikit-learn
gregoryperkins/Separate_CL
[AAAI 2022 Oral] Separate Contrastive Learning for Organs-at-Risk and Gross-Tumor-Volume Segmentation with Limited Annotation
gregoryperkins/singa-auto
A platform to automate the training (including hyper-parameter tuning) and inference of machine learning models
gregoryperkins/TABS
TABS: Transformer-based Automated Brain Segmentation
gregoryperkins/TkFontAwesome
Use any of the 1k+ free FontAwesome icons in your tkinter application.
gregoryperkins/Tkinter-Webcam
Easily display a webcam window in a Tkinter GUI
gregoryperkins/TopasGraphSim
A GUI to simplify and streamline the plotting and analysis of medical physics simulations
gregoryperkins/WORD
WORD: Revisiting Organs Segmentation in the Whole Abdominal Region